ggKbase home page

sw_10_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 84 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_4_1
unknown

Not on your lists

comp(480..719)
DNA (240bp) protein (80aa)

This feature has no annotations

sw_10_scaffold_4_2
Chlorella variabilis, Chlorella, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(1136..1558)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Chlorella variabilis RepID=E1Z365_CHLVA
Putative uncharacterized protein {ECO:0000313|EMBL:EFN60119.1}; TaxID=554065 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella.;" source="Chlorel
probable pre-mRNA-splicing factor ATP-dependent RNA helicase-like
sw_10_scaffold_4_3
Micromonas sp. RCC299, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(1555..2520)
DNA (966bp) protein (322aa)
Predicted protein n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1FEJ8_MICSR
Uncharacterized protein {ECO:0000313|EMBL:ACO68971.1}; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Mic
ATP-dependent helicase HrpA
sw_10_scaffold_4_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2765..3340
DNA (576bp) protein (192aa)
Uncharacterized protein n=2 Tax=Halococcus hamelinensis RepID=M0LTD7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36822.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_10_scaffold_4_5
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3465..4289)
DNA (825bp) protein (275aa)
Beta-lactamase n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZFU9_9EURY
Beta-lactamase {ECO:0000313|EMBL:ELY84043.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
ATP-binding protein
sw_10_scaffold_4_6
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4329..5870)
DNA (1542bp) protein (514aa)
ATPase AAA n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B039_9EURY
ATPase AAA {ECO:0000313|EMBL:ELZ04155.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
ATPase AAA
sw_10_scaffold_4_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6007..7146
DNA (1140bp) protein (380aa)
Acetyl-CoA acetyltransferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5X7_9EURY
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EMA41096.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensi
acetyl-CoA acetyltransferase
sw_10_scaffold_4_8
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7241..7711
DNA (471bp) protein (157aa)
Phosphate-starvation-inducible E n=1 Tax=Halonotius sp. J07HN4 RepID=U1NVJ7_9EURY
hypothetical protein
Phosphate-starvation-inducible E {ECO:0000313|EMBL:ERH08070.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.
sw_10_scaffold_4_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7785..8540)
DNA (756bp) protein (252aa)
3-oxoacyl-ACP reductase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUA6_9EURY
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EMA36753.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
short-chain dehydrogenase/reductase SDR
sw_10_scaffold_4_10
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8836..10002
DNA (1167bp) protein (389aa)
Alpha-1,4-glucan-protein synthase, UDP-forming n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CHS5_9EURY
Alpha-1,4-glucan-protein synthase, UDP-forming {ECO:0000313|EMBL:ELZ22178.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloter
Reversibly glycosylated polypeptide
sw_10_scaffold_4_11
unknown

Not on your lists

10177..10572
DNA (396bp) protein (132aa)

This feature has no annotations

sw_10_scaffold_4_12
unknown

Not on your lists

10569..10886
DNA (318bp) protein (106aa)

This feature has no annotations

sw_10_scaffold_4_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11043..12470
DNA (1428bp) protein (476aa)
Extracellular solute-binding protein family 1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ44_9EURY
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EMA45373.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
ibp; iron-binding protein
sw_10_scaffold_4_14
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12471..14192
DNA (1722bp) protein (574aa)
Iron ABC transporter permease n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MA86_HALMO
Iron ABC transporter permease {ECO:0000313|EMBL:EMA41315.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DS
iron ABC transporter permease
sw_10_scaffold_4_15
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14152..15510
DNA (1359bp) protein (453aa)
ABC transporter n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DTT0_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ38082.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 1137.;"
potA4; spermidine/putrescine ABC transporter ATP-binding protein
sw_10_scaffold_4_16
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15507..17663
DNA (2157bp) protein (719aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BER3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ08124.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
sw_10_scaffold_4_17
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17673..18287
DNA (615bp) protein (205aa)
Gluconate 2-dehydrogenase subunit 3 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFC1_9EURY
gluconate 2-dehydrogenase subunit 3
Gluconate 2-dehydrogenase subunit 3 {ECO:0000313|EMBL:CCQ33925.1}; Twin arginine translocation signal domain containing protein {ECO:0000313|EMBL:ERJ05751.1}; TaxID=1033806 species="Archaea; Euryarcha
sw_10_scaffold_4_18
unknown

Not on your lists

18413..18634
DNA (222bp) protein (74aa)

This feature has no annotations

sw_10_scaffold_4_19
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18631..21267
DNA (2637bp) protein (879aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LV26_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36993.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
conserved hypothetical membrane protein, putative glycosyltransferase
sw_10_scaffold_4_20
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21358..22098)
DNA (741bp) protein (247aa)
Family 2 glycosyl transferase n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BFX1_9EURY
Family 2 glycosyl transferase {ECO:0000313|EMBL:ELZ09362.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 1462
glycosyl transferase
sw_10_scaffold_4_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22220..22495)
DNA (276bp) protein (92aa)
Transcriptional regulator, MarR family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI17_9EURY
Transcriptional regulator, MarR family protein {ECO:0000313|EMBL:EMA45367.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
transcriptional regulator, MarR family
sw_10_scaffold_4_22
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22880..23560
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NW12_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48141.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_10_scaffold_4_23
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23749..25023
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MYW2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49590.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_10_scaffold_4_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25194..26195)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRN6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA35763.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_10_scaffold_4_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26215..27843)
DNA (1629bp) protein (543aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ36_9EURY
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EMA45363.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
hypothetical protein
sw_10_scaffold_4_26
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28175..29527
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NCB5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54320.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_10_scaffold_4_27
unknown

Not on your lists

comp(29510..29680)
DNA (171bp) protein (57aa)

This feature has no annotations

sw_10_scaffold_4_28
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29785..31551
DNA (1767bp) protein (589aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M2X7_9EURY
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EMA38959.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halo
hypothetical protein
sw_10_scaffold_4_29
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32072..32653
DNA (582bp) protein (194aa)
Acetyltransferase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5R8_HALJB
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:ADJ13724.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (str
sw_10_scaffold_4_30
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32650..33738
DNA (1089bp) protein (363aa)
Glutamine--scyllo-inositol transaminase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUI3_9EURY
Glutamine--scyllo-inositol transaminase {ECO:0000313|EMBL:EMA35760.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
Displaying items 1-30 of 84 in total

View Taxonomy