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sw_10_scaffold_550

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_550_trna_1
unknown

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comp(65..136)
DNA (72bp)
transferRNA
sw_10_scaffold_550_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(239..910)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9S3_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16412.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_10_scaffold_550_2
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1400..1708)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=4 Tax=Haloquadratum walsbyi RepID=RS10_HALWD
rps10p; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" s
sw_10_scaffold_550_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1709..2974)
DNA (1266bp) protein (422aa)
elongation factor 1-alpha (EC:2.7.7.4)
Elongation factor 1-alpha n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5R7_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
sw_10_scaffold_550_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3154..4203)
DNA (1050bp) protein (350aa)
homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] id=24616505 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000313|EMBL:ESP87588.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halob
sw_10_scaffold_550_5
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4200..4742)
DNA (543bp) protein (181aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5UZT0_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA15117.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_10_scaffold_550_6
CSP1_5_NC10, NC10, Bacteria

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5388..5723
DNA (336bp) protein (112aa)
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase id=14430160 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase Tax=CSP1_5_NC10
dioxygenase, ferredoxin subunit
sw_10_scaffold_550_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5876..7057
DNA (1182bp) protein (394aa)
Nucleotidyl transferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8N9_9EURY
Nucleotidyl transferase {ECO:0000313|EMBL:EMA53943.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
glucose-1-phosphate thymidylyltransferase
sw_10_scaffold_550_8
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7157..7435
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0D5H0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30741.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
hypothetical protein
sw_10_scaffold_550_9
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7554..8399)
DNA (846bp) protein (282aa)
ABC-type cobalt transport system, ATPase component n=1 Tax=Halonotius sp. J07HN4 RepID=U1QGY2_9EURY
ABC-type cobalt transport system, ATPase component {ECO:0000313|EMBL:ERH06103.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halo
cbiO; ABC-type transport system ATP-binding protein (probable substrate cobalt/nickel/biotin)
sw_10_scaffold_550_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8396..9196)
DNA (801bp) protein (267aa)
ABC-type cobalt transport system, permease component CbiQ related transporter n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PIH3_9EURY
ABC-type cobalt transport system, permease component CbiQ related transporter {ECO:0000313|EMBL:ERG91966.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae;
cbiQ2; ABC-type transport system permease protein (probable substrate cobalt/nickel/biotin)
sw_10_scaffold_550_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9210..9509)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXJ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38166.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_10_scaffold_550_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9509..10195)
DNA (687bp) protein (229aa)
ABC-type transport system permease protein (Probable substrate cobalt/nickel/biotin) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRF8_NATM8
cbiM; ABC-type transport system permease protein (probable substrate cobalt/nickel/biotin)
ABC-type transport system permease protein (Probable substrate cobalt/nickel/biotin) {ECO:0000313|EMBL:CCQ36794.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
sw_10_scaffold_550_13
unknown

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comp(10253..10507)
DNA (255bp) protein (85aa)

This feature has no annotations

sw_10_scaffold_550_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10789..11220
DNA (432bp) protein (144aa)
Putative nickel-responsive regulator n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSS3_9EURY
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
transcriptional regulator
sw_10_scaffold_550_15
unknown

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comp(11451..12092)
DNA (642bp) protein (214aa)

This feature has no annotations

Displaying 16 items

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