ggKbase home page

sw_10_scaffold_699

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_699_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..223
DNA (222bp) protein (74aa)
Aminopeptidase (Homolog to leucyl aminopeptidase / aminopeptidase T) {ECO:0000313|EMBL:CAI48527.1}; EC=3.4.11.- {ECO:0000313|EMBL:CAI48527.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacter
Aminopeptidase (Homolog to leucyl aminopeptidase / aminopeptidase T) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITK6_NATPD
pepB_2; aminopeptidase ( leucyl aminopeptidase, aminopeptidase T) 2
sw_10_scaffold_699_2
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

446..1135
DNA (690bp) protein (230aa)
K+ transport system, NAD-binding component n=1 Tax=halophilic archaeon J07HB67 RepID=U1PLH7_9EURY
K+ transport system, NAD-binding component {ECO:0000313|EMBL:ERH11301.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
K+ transport system, NAD-binding component
sw_10_scaffold_699_3
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1477..3144)
DNA (1668bp) protein (556aa)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325, ECO:0000313|EMBL:ELY59544.1}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325, ECO:000031
DNA polymerase ii small subunit (EC:2.7.7.7)
DNA polymerase II small subunit n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XCX3_9EURY
sw_10_scaffold_699_4
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3244..3945
DNA (702bp) protein (234aa)
Signal peptidase I n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3ACT1_9EURY
Signal peptidase I {ECO:0000313|EMBL:GAD52583.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
sec11a; signal sequence peptidase
sw_10_scaffold_699_5
unknown

Not on your lists

4342..4968
DNA (627bp) protein (209aa)

This feature has no annotations

sw_10_scaffold_699_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5021..6835)
DNA (1815bp) protein (605aa)
ORC1-type DNA replication protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1F2_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
orc1/cdc6 family replication initiation protein
sw_10_scaffold_699_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7768..8400
DNA (633bp) protein (211aa)
GTP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MA72_9EURY
GTP-binding protein {ECO:0000313|EMBL:EMA42692.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
small GTP-binding protein domain
sw_10_scaffold_699_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8404..8832
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBG8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42693.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_10_scaffold_699_9
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8837..9958
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XVW7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY65551.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
sw_10_scaffold_699_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10028..11536
DNA (1509bp) protein (503aa)
Efflux protein, mate family n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IXN4_9EURY
Efflux protein, mate family {ECO:0000313|EMBL:ESP87922.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Ha
MATE efflux family protein
sw_10_scaffold_699_11
unknown

Not on your lists

11641..11730
DNA (90bp) protein (30aa)

This feature has no annotations

sw_10_scaffold_699_12
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11985..12404
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MG40_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA44323.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_10_scaffold_699_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12559..13137)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDK6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42754.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_10_scaffold_699_14
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13239..13547)
DNA (309bp) protein (103aa)
Conserved hypothetical membrane protein (DUF2391) n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PPZ1_9EURY
conserved hypothetical membrane protein (DUF2391)
Conserved hypothetical membrane protein (DUF2391) {ECO:0000313|EMBL:CCQ34114.1}; Putative integral membrane protein {ECO:0000313|EMBL:ERJ07337.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Haloba
sw_10_scaffold_699_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14074..14754
DNA (681bp) protein (227aa)
probable S-adenosylmethionine-dependent methyltransferase (homolog to 24-sterol C-methyltransferase) (EC:2.1.1.-)
S-adenosylmethionine-dependent methyltransferase 3 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M593_9EURY
S-adenosylmethionine-dependent methyltransferase 3 {ECO:0000313|EMBL:EMA40977.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
sw_10_scaffold_699_16
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14854..16023)
DNA (1170bp) protein (390aa)
ABC transporter n=1 Tax=Halogranum salarium B-1 RepID=J3A3H7_9EURY
ABC transporter {ECO:0000313|EMBL:EJN59943.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ABC transporter
sw_10_scaffold_699_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16025..17782)
DNA (1758bp) protein (586aa)
ABC transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP59_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ23664.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
ABC transporter
sw_10_scaffold_699_18
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18053..19201)
DNA (1149bp) protein (383aa)
ABC transporter substrate-binding protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GZP4_9EURY
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ76977.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax lars
ThiB subfamily ABC transporter periplasmic binding protein
sw_10_scaffold_699_19
unknown

Not on your lists

comp(19436..20119)
DNA (684bp) protein (228aa)

This feature has no annotations

sw_10_scaffold_699_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20282..20911
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBW5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55048.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_699_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21005..21412)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAB1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42686.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_10_scaffold_699_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21743..22921
DNA (1179bp) protein (393aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M575_9EURY
sw_10_scaffold_699_23
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22985..23665)
DNA (681bp) protein (227aa)
Serine/threonine protein phosphatase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MEY7_HALMO
Serine/threonine protein phosphatase {ECO:0000313|EMBL:EMA44312.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morr
phosphodiesterase
sw_10_scaffold_699_24
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23854..24453)
DNA (600bp) protein (200aa)
IMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00705}; EC=3.5.4.10 {ECO:0000256|HAMAP-Rule:MF_00705};; IMP synthase {ECO:0000256|HAMAP-Rule:MF_00705}; Inosinicase {ECO:0000256|HAMAP-Rule:MF_00705}; Tax
IMP cyclohydrolase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MF13_HALMO
IMP cyclohydrolase
sw_10_scaffold_699_trna_1
unknown

Not on your lists

24591..24663
DNA (73bp)
transferRNA
Displaying 25 items

View Taxonomy