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sw_10_scaffold_88

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_88_1
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..370
DNA (369bp) protein (123aa)
Transposase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H978_9EURY
Transposase {ECO:0000313|EMBL:ELZ80358.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
transposase
sw_10_scaffold_88_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(723..1544)
DNA (822bp) protein (274aa)
Short-chain family oxidoreductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0C9S0_9EURY
Short-chain family oxidoreductase {ECO:0000313|EMBL:ELZ19980.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carls
short-chain dehydrogenase/reductase SDR
sw_10_scaffold_88_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1661..2548
DNA (888bp) protein (296aa)
SMP-30/gluconolaconase/LRE-like region-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNY6_9EURY
SMP-30/gluconolaconase/LRE-like region-containing protein {ECO:0000313|EMBL:ELZ24102.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" s
SMP-30/gluconolaconase/LRE-like region-containing protein
sw_10_scaffold_88_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2602..3615)
DNA (1014bp) protein (338aa)
Mannonate dehydratase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLI5_9EURY
Mannonate dehydratase {ECO:0000313|EMBL:ELZ24101.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
Mannonate dehydratase
sw_10_scaffold_88_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3812..4168
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DB08_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ32636.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
sw_10_scaffold_88_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4235..5125)
DNA (891bp) protein (297aa)
Amidohydrolase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DD24_9EURY
Amidohydrolase {ECO:0000313|EMBL:ELZ32637.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.
hypothetical protein
sw_10_scaffold_88_7
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5122..5925)
DNA (804bp) protein (268aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEH38964.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEH38964.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrial
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DD75_HALXS
sw_10_scaffold_88_8
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7059..7334)
DNA (276bp) protein (92aa)
Glutaredoxin n=2 Tax=Haloarcula hispanica RepID=G0HW60_HALHT
grx; glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:AEM56482.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain ATCC 33960
sw_10_scaffold_88_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7454..7948
DNA (495bp) protein (165aa)
Peroxiredoxin-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6M5_9EURY
Peroxiredoxin-like protein {ECO:0000313|EMBL:EMA52789.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
homolog to peroxiredoxin
sw_10_scaffold_88_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8011..10662)
DNA (2652bp) protein (884aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP82_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46524.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
rnd superfamily exporter
sw_10_scaffold_88_11
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11033..12022
DNA (990bp) protein (330aa)
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VWE8_9EURY
5,10-methylenetetrahydromethanopterin reductase {ECO:0000313|EMBL:ELY41495.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natron
luciferase-like protein
sw_10_scaffold_88_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12262..13032
DNA (771bp) protein (257aa)
Putative phosphate permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9C0_9EURY
Putative phosphate permease {ECO:0000313|EMBL:EMA53704.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
pitA; putative phosphate permease
sw_10_scaffold_88_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13136..13897)
DNA (762bp) protein (254aa)
HAD-superfamily hydrolase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4L7_9EURY
HAD-superfamily hydrolase {ECO:0000313|EMBL:EMA52034.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis
haloacid dehalogenase superfamily enzyme, subfamily IA
sw_10_scaffold_88_14
unknown

Not on your lists

comp(13894..14562)
DNA (669bp) protein (223aa)

This feature has no annotations

sw_10_scaffold_88_15
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14642..15781)
DNA (1140bp) protein (380aa)
Beta-lactamase domain protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y7K9_9EURY
Beta-lactamase domain protein {ECO:0000313|EMBL:ELY70009.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 104
Zn-dependent hydrolase, glyoxylase
sw_10_scaffold_88_16
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15968..16786
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2Z932_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57140.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
alpha/beta hydrolase fold protein
sw_10_scaffold_88_17

Not on your lists

17066..18286
DNA (1221bp) protein (407aa)
Nitrate/nitrite transporter n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZPK4_9ARCH
Nitrate/nitrite transporter {ECO:0000313|EMBL:ESS04555.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
narK2; major facilitator superfamily transporter
sw_10_scaffold_88_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18480..19529
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N424_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52611.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_88_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19775..21544
DNA (1770bp) protein (590aa)
Thiamine pyrophosphate domain-containing TPP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI99_9EURY
Thiamine pyrophosphate domain-containing TPP-binding protein {ECO:0000313|EMBL:EMA45416.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
thiamine pyrophosphate protein TPP binding domain-containing protein
sw_10_scaffold_88_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22098..22340)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N744_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53378.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_88_21
unknown

Not on your lists

comp(22473..22688)
DNA (216bp) protein (72aa)

This feature has no annotations

sw_10_scaffold_88_22
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22772..23110
DNA (339bp) protein (113aa)
DNA binding domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSG7_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EFW92376.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
DNA binding domain-containing protein
sw_10_scaffold_88_23
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23334..24506)
DNA (1173bp) protein (391aa)
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:CCH52927.1}; EC=4.2.1.6 {ECO:0000313|EMBL:CCH52927.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyto
Mandelate racemase/muconate lactonizing protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GGA2_9BACT
Mandelate racemase
sw_10_scaffold_88_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(24623..25282)
DNA (660bp) protein (220aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HNA0_9EURY
dimethylmenaquinone methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dimethylmenaquinone methyltransferase
sw_10_scaffold_88_25
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25956..26141
DNA (186bp) protein (62aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XTP3_9EURY
3-oxoacyl-ACP reductase
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:AHF99503.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_10_scaffold_88_26

Not on your lists

comp(26186..27388)
DNA (1203bp) protein (401aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:AEN07014.1}; EC=5.4.3.8 {ECO:0000313|EMBL:AEN07014.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=halophilic archaeon DL31 RepID=G2MNN6_9ARCH
sw_10_scaffold_88_27
unknown

Not on your lists

comp(27458..27709)
DNA (252bp) protein (84aa)

This feature has no annotations

sw_10_scaffold_88_28
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27787..28005)
DNA (219bp) protein (73aa)
Transposase IS4 family protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XP75_9EURY
Transposase IS4 family protein {ECO:0000313|EMBL:ELY63347.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10
sw_10_scaffold_88_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28007..28474)
DNA (468bp) protein (156aa)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGS6_9EURY
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:EMA44932.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
protein-tyrosine-phosphatase
sw_10_scaffold_88_30
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28488..28706)
DNA (219bp) protein (73aa)
Arsenical-resistance protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZZ9_9EURY
Arsenical-resistance protein {ECO:0000313|EMBL:EMA37705.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensi
arsenical-resistance protein
Displaying 30 items

View Taxonomy