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sw_10_scaffold_1767

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1767_1
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..138
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EA16_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ44636.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
homolog to endonuclease VapC
sw_10_scaffold_1767_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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229..495
DNA (267bp) protein (89aa)
Homolog to antitoxin VapB n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPB5_NATM8
homolog to antitoxin VapB
Homolog to antitoxin VapB {ECO:0000313|EMBL:CCQ35878.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_10_scaffold_1767_3
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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702..803
DNA (102bp) protein (34aa)
Putative nucleic acid-binding protein, contains PIN domain protein {ECO:0000313|EMBL:ERG95707.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadra
hypothetical protein
sw_10_scaffold_1767_4
unknown

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comp(805..1251)
DNA (447bp) protein (149aa)

This feature has no annotations

sw_10_scaffold_1767_trna_1
unknown

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1491..1575
DNA (85bp)
transferRNA
sw_10_scaffold_1767_5
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1592..2122
DNA (531bp) protein (177aa)
30S ribosomal protein S13 n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KVH9_HALAR
rps13p; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis
sw_10_scaffold_1767_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2122..2361
DNA (240bp) protein (80aa)
30S ribosomal protein S4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT56_9EURY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
rps4p; 30S ribosomal protein S4P
sw_10_scaffold_1767_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2313..2591
DNA (279bp) protein (93aa)
30S ribosomal protein S4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT56_9EURY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
rps4p; 30S ribosomal protein S4P
sw_10_scaffold_1767_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2588..2977
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH1_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rps11p; 30S ribosomal protein S11
sw_10_scaffold_1767_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2980..3795
DNA (816bp) protein (272aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit D n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUM9_9EURY
RNA polymerase insert
sw_10_scaffold_1767_trna_2
unknown

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3991..4075
DNA (85bp)
transferRNA
sw_10_scaffold_1767_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4085..4435
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQR0_9EURY
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
50S ribosomal protein L18e
sw_10_scaffold_1767_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4432..4917
DNA (486bp) protein (162aa)
50S ribosomal protein L13 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J218_9EURY
50S ribosomal protein L13Ae (L13p)
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
sw_10_scaffold_1767_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4911..5309
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT60_9EURY
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
rps9p; 30S ribosomal protein S9
sw_10_scaffold_1767_13
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5317..5511
DNA (195bp) protein (65aa)
rpoN; DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit N n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH4_9EURY
sw_10_scaffold_1767_14
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5508..5684
DNA (177bp) protein (59aa)
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
DNA-directed RNA polymerase subunit K n=10 Tax=Haloferax RepID=D4GWX4_HALVD
sw_10_scaffold_1767_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5713..7590
DNA (1878bp) protein (626aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQR5_9EURY
enolase
sw_10_scaffold_1767_16
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7775..8374
DNA (600bp) protein (200aa)
Transcription regulator n=4 Tax=Haloferax RepID=M0FM14_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ59614.1}; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-646.;"
tetR2; transcription regulator
Displaying 18 items

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