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sw_10_scaffold_1321

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1321_1
unknown

Not on your lists

comp(3..206)
DNA (204bp) protein (68aa)

This feature has no annotations

sw_10_scaffold_1321_2
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

241..705
DNA (465bp) protein (155aa)
Uncharacterized protein n=7 Tax=Haloferax RepID=D4GVL3_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CQR50478.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
sw_10_scaffold_1321_3

Not on your lists

comp(785..1069)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XXH3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS06973.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_10_scaffold_1321_4
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1290..1577
DNA (288bp) protein (96aa)
Transposase n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZJY0_9EURY
Transposase {ECO:0000313|EMBL:ELY85882.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
tnp; transposase and inactivated derivatives
sw_10_scaffold_1321_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1675..2325)
DNA (651bp) protein (217aa)
DNA binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N480_9EURY
DNA binding protein {ECO:0000313|EMBL:EMA51914.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
Bacterio-opsin activator HTH domain protein
sw_10_scaffold_1321_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2459..2761
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INY9_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50163.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_10_scaffold_1321_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2774..3367)
DNA (594bp) protein (198aa)
uridine kinase; K00876 uridine kinase [EC:2.7.1.48] id=24614669 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|
uridine kinase
sw_10_scaffold_1321_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3410..4210
DNA (801bp) protein (267aa)
gch3; GTP cyclohydrolase III (EC:3.5.4.29)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
GTP cyclohydrolase III n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKV7_NATM8
sw_10_scaffold_1321_9
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4320..5120
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MZS6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89715.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_10_scaffold_1321_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5299..6627
DNA (1329bp) protein (443aa)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQY1_NATM8
livJ1; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ36589.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteri
sw_10_scaffold_1321_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6738..7484)
DNA (747bp) protein (249aa)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y284_NATM8
livF1; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ36590.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
sw_10_scaffold_1321_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7494..8360)
DNA (867bp) protein (289aa)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XR21_NATM8
livG1; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ36591.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
sw_10_scaffold_1321_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8353..9624)
DNA (1272bp) protein (424aa)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQY8_NATM8
livM1; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ36592.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
sw_10_scaffold_1321_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9621..10325)
DNA (705bp) protein (235aa)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKV8_NATM8
livH1; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ36593.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
sw_10_scaffold_1321_15
unknown

Not on your lists

10365..10493
DNA (129bp) protein (43aa)

This feature has no annotations

sw_10_scaffold_1321_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10896..12080
DNA (1185bp) protein (395aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000255|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000255|HAMAP-Rule:MF_00145};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Phosphoglycerate kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PGK_NATPD
sw_10_scaffold_1321_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12083..12589
DNA (507bp) protein (169aa)
GNAT family acetyltransferase {ECO:0000313|EMBL:CAI50155.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAI50155.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
GNAT family acetyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INZ7_NATPD
protein N-acetyltransferase-like protein
sw_10_scaffold_1321_18
unknown

Not on your lists

13278..13418
DNA (141bp) protein (47aa)

This feature has no annotations

sw_10_scaffold_1321_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13553..14938)
DNA (1386bp) protein (462aa)
Sensor box histidine kinase {ECO:0000313|EMBL:CAI49769.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CAI49769.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Sensor box histidine kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ29_NATPD
signal-transducing histidine kinase
sw_10_scaffold_1321_20
unknown

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15074..15847
DNA (774bp) protein (258aa)

This feature has no annotations

sw_10_scaffold_1321_21
unknown

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15877..16107
DNA (231bp) protein (77aa)

This feature has no annotations

sw_10_scaffold_1321_22
unknown

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comp(16193..16372)
DNA (180bp) protein (60aa)

This feature has no annotations

sw_10_scaffold_1321_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16441..18285)
DNA (1845bp) protein (615aa)
accA_2; biotin carboxylase 1, acyl-CoA carboxylase, alpha subunit 2 (EC:6.3.4.14)
Propionyl-CoA carboxylase biotin carboxylase component {ECO:0000313|EMBL:CAI50275.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CAI50275.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteri
Propionyl-CoA carboxylase biotin carboxylase component n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INM7_NATPD
sw_10_scaffold_1321_24
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18550..18879
DNA (330bp) protein (110aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P454_HALMD
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACV47876.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source=
sw_10_scaffold_1321_25
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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19367..19651
DNA (285bp) protein (95aa)
PAS-PAC-PAC sensing histidine kinase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0HZS1_9EURY
PAS-PAC-PAC sensing histidine kinase {ECO:0000313|EMBL:ELZ89971.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifon
fixL; PAS-PAC-PAC sensing histidine kinase
Displaying 25 items

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