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sw_10_scaffold_1388

Search features with annotation key words

Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1388_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3..443
DNA (441bp) protein (147aa)
UspA domain-containing protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D9P7_9EURY
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:ELZ30884.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pal
sw_10_scaffold_1388_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(440..1135)
DNA (696bp) protein (232aa)
dehydrogenase/reductase 14 (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CAI50472.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAI50472.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN34_NATPD
sw_10_scaffold_1388_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1232..2713
DNA (1482bp) protein (494aa)
crtI_1; phytoene dehydrogenase 1 (phytoene desaturase) (EC:1.14.99.-)
Phytoene dehydrogenase (Phytoene desaturase) {ECO:0000313|EMBL:CAI50473.1}; EC=1.14.99.- {ECO:0000313|EMBL:CAI50473.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Phytoene dehydrogenase (Phytoene desaturase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN33_NATPD
sw_10_scaffold_1388_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2747..3619
DNA (873bp) protein (291aa)
lye; lycopene elongase (EC:2.5.1.-)
Lycopene elongase {ECO:0000313|EMBL:CCQ37170.1}; EC=2.5.1.- {ECO:0000313|EMBL:CCQ37170.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
Lycopene elongase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS73_NATM8
sw_10_scaffold_1388_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3612..4436
DNA (825bp) protein (275aa)
Probable carotenoid biosynthesis protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN31_NATPD
carotenoid biosynthesis protein
Probable carotenoid biosynthesis protein {ECO:0000313|EMBL:CAI50475.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomo
sw_10_scaffold_1388_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5034..6272)
DNA (1239bp) protein (413aa)
crtB; geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene synthase) (EC:2.5.1.32)
Phytoene synthase {ECO:0000313|EMBL:CAI50476.1}; EC=2.5.1.32 {ECO:0000313|EMBL:CAI50476.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
Phytoene synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN30_NATPD
sw_10_scaffold_1388_7
unknown

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6467..6766
DNA (300bp) protein (100aa)

This feature has no annotations

sw_10_scaffold_1388_8
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6767..7150)
DNA (384bp) protein (128aa)
Probable glycine cleavage system H protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W994_9EURY
Probable glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natrono
glycine cleavage system protein H
sw_10_scaffold_1388_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7526..8335)
DNA (810bp) protein (270aa)
Agmatinase {ECO:0000313|EMBL:CCI69574.1}; EC=3.5.3.11 {ECO:0000313|EMBL:CCI69574.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sou
speB2; agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=I7IRC4_NATPD
sw_10_scaffold_1388_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8341..8715)
DNA (375bp) protein (125aa)
Translation initiation factor 5A n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ55_NATM8
tif5A; translation initiation factor aIF-5A
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_0008
sw_10_scaffold_1388_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8767..9057)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCF0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43426.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
Displaying 11 items

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