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sw_10_scaffold_708

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_708_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..798
DNA (798bp) protein (266aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=348780 species="Archaea;
Tryptophan--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU71_NATPD
sw_10_scaffold_708_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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788..1081
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DIM7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ35325.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_10_scaffold_708_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1138..2046
DNA (909bp) protein (303aa)
ABC-type transport system ATP-binding protein (Probable substrate copper) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK81_NATM8
nosF3; ABC-type transport system ATP-binding protein (probable substrate copper)
ABC-type transport system ATP-binding protein (Probable substrate copper) {ECO:0000313|EMBL:CCQ35422.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
sw_10_scaffold_708_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2043..2888
DNA (846bp) protein (282aa)
ABC-type transport system permease protein (Probable substrate copper) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITA3_NATPD
abc25p; copper ABC transporter permease
ABC-type transport system permease protein (Probable substrate copper) {ECO:0000313|EMBL:CAI48631.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Nat
sw_10_scaffold_708_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3106..4314
DNA (1209bp) protein (403aa)
ilvA; threonine dehydratase (EC:4.3.1.19)
Threonine ammonia-lyase {ECO:0000313|EMBL:CAI48629.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CAI48629.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Threonine ammonia-lyase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITA5_NATPD
sw_10_scaffold_708_6
unknown

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comp(4563..5078)
DNA (516bp) protein (172aa)

This feature has no annotations

sw_10_scaffold_708_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5863..7365)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNC1_NATM8
hypothetical protein
UCP012666 family protein {ECO:0000313|EMBL:CCQ35418.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_10_scaffold_708_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7449..8099)
DNA (651bp) protein (217aa)
Uncharacterized protein id=24647286 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:EMA54482.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_10_scaffold_708_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8204..8671)
DNA (468bp) protein (156aa)
hypothetical protein
LemA domain-containing protein id=24649637 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10727.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_10_scaffold_708_10
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9009..9611)
DNA (603bp) protein (201aa)
LemA-like protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8Q2_9EURY
lemA-like protein
LemA-like protein {ECO:0000313|EMBL:AGN00824.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_10_scaffold_708_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10263..11420)
DNA (1158bp) protein (386aa)
PQQ repeat protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZ41_NATM8
cell surface protein/lipoprotein
PQQ repeat protein {ECO:0000313|EMBL:CAI48627.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_10_scaffold_708_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11661..12884
DNA (1224bp) protein (408aa)
Sugar transporter n=2 Tax=Haloarcula hispanica RepID=G0I0C0_HALHT
sugar transporter
Sugar transporter {ECO:0000313|EMBL:AEM59341.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain ATCC
sw_10_scaffold_708_13
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12901..14055)
DNA (1155bp) protein (385aa)
Aspartate transaminase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PJN1_9EURY
Aspartate transaminase {ECO:0000313|EMBL:EMA69829.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.
aspartate/tyrosine/aromatic aminotransferase
sw_10_scaffold_708_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14414..15772
DNA (1359bp) protein (453aa)
Protein up-regulated by thyroid hormone-putative PQQ-dependent glucose dehydrogenase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVG0_9EURY
Protein up-regulated by thyroid hormone-putative PQQ-dependent glucose dehydrogenase {ECO:0000313|EMBL:EFW91482.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
glucose/sorbosone dehydrogenase
sw_10_scaffold_708_15

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comp(15780..16580)
DNA (801bp) protein (267aa)
Small-conductance mechanosensitive channel n=3 Tax=Archaea RepID=V4XZV6_9ARCH
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:ESS07898.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
msc_4; mechanosensitive channel
sw_10_scaffold_708_16

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comp(16574..17179)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4XI45_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07899.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
Displaying 16 items

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