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sw_10_scaffold_1203

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1203_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..157
DNA (156bp) protein (52aa)
UDP-glucose 4-epimerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEM1_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA55514.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
oxidoreductase
sw_10_scaffold_1203_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(158..946)
DNA (789bp) protein (263aa)
aglF; sugar nucleotidyltransferase AglF (EC:2.7.7.-)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NFS8_9EURY
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:EMA55515.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
sw_10_scaffold_1203_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1058..2377
DNA (1320bp) protein (440aa)
aglM; UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCG4_9EURY
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:EMA55516.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
sw_10_scaffold_1203_4
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2364..3659)
DNA (1296bp) protein (432aa)
IS1341-type transposase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FQI1_9EURY
IS1341-type transposase {ECO:0000313|EMBL:ELZ62235.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
transposase, IS605 OrfB family
sw_10_scaffold_1203_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3861..4457
DNA (597bp) protein (199aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobac
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC48_9EURY
hypothetical protein rbh
sw_10_scaffold_1203_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4457..4849
DNA (393bp) protein (131aa)
Zinc finger CHY domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQE0_9EURY
Zinc finger CHY domain protein {ECO:0000313|EMBL:EMA46959.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
hypothetical protein
sw_10_scaffold_1203_trna_1
unknown

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4916..4988
DNA (73bp)
transferRNA
sw_10_scaffold_1203_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5269..5712
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMP1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46957.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_10_scaffold_1203_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6209..8026
DNA (1818bp) protein (606aa)
Ferredoxin-nitrite reductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVP0_9EURY
Ferredoxin-nitrite reductase {ECO:0000313|EMBL:EMA48485.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
nirA1; ferredoxin-nitrite reductase
sw_10_scaffold_1203_9
unknown

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8019..8147
DNA (129bp) protein (43aa)

This feature has no annotations

sw_10_scaffold_1203_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8144..10417
DNA (2274bp) protein (758aa)
Nitrate reductase, catalytic subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUN5_9EURY
Nitrate reductase, catalytic subunit {ECO:0000313|EMBL:EMA48484.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
anaerobic dehydrogenase, typically selenocysteine-containing
sw_10_scaffold_1203_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10417..11736
DNA (1320bp) protein (440aa)
Nitrate/nitrite transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MT19_9EURY
Nitrate/nitrite transporter {ECO:0000313|EMBL:EMA48483.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
nitrate/nitrite transporter
sw_10_scaffold_1203_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12033..12161
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMQ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46956.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_10_scaffold_1203_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12163..12915)
DNA (753bp) protein (251aa)
Purine or other phosphorylase family 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NFT3_9EURY
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:EMA55520.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus s
purine or other phosphorylase family 1
sw_10_scaffold_1203_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13136..14812
DNA (1677bp) protein (559aa)
Thermosome n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCG9_9EURY
Thermosome {ECO:0000313|EMBL:EMA55521.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
thermosome
Displaying 15 items

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