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sw_10_scaffold_1863

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1863_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..315)
DNA (315bp) protein (105aa)
Protein translocase subunit SecY n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N6H4_9EURY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=122745
secY; preprotein translocase subunit SecY
sw_10_scaffold_1863_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(326..850)
DNA (525bp) protein (175aa)
50S ribosomal protein L15P n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHG9_9EURY
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
rpl15p; 50S ribosomal protein L15P
sw_10_scaffold_1863_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(847..1311)
DNA (465bp) protein (155aa)
50S ribosomal protein L30P n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFJ6_9EURY
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
rpl30p; 50S ribosomal protein L30P
sw_10_scaffold_1863_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1311..1889)
DNA (579bp) protein (193aa)
30S ribosomal protein S5 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVL0_9EURY
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
rps5p; 30S ribosomal protein S5
sw_10_scaffold_1863_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1882..2463)
DNA (582bp) protein (194aa)
50S ribosomal protein L18P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX09_9EURY
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
50S ribosomal protein L18
sw_10_scaffold_1863_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2466..2927)
DNA (462bp) protein (154aa)
50S ribosomal protein L19e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI75_9EURY
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
rpl19A; 50S ribosomal protein L19e
sw_10_scaffold_1863_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2920..3921)
DNA (1002bp) protein (334aa)
50S ribosomal protein L32e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUR2_9EURY
50S ribosomal protein L32e {ECO:0000313|EMBL:EMA44134.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
50S ribosomal protein L32e
sw_10_scaffold_1863_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3914..4462)
DNA (549bp) protein (183aa)
50S ribosomal protein L6P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUF8_9EURY
50S ribosomal protein L6P {ECO:0000313|EMBL:EMA49372.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
ribosomal protein L6P
sw_10_scaffold_1863_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4465..4857)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEE1_9EURY
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
rps8p; 30S ribosomal protein S8P
sw_10_scaffold_1863_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4854..5027)
DNA (174bp) protein (58aa)
30S ribosomal protein S14 type Z n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEH5_9EURY
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
rps14P; 30S ribosomal protein S14P
sw_10_scaffold_1863_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5024..5542)
DNA (519bp) protein (173aa)
50S ribosomal protein L5 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI71_9EURY
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
50S ribosomal protein L5
sw_10_scaffold_1863_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5539..5907)
DNA (369bp) protein (123aa)
30S ribosomal protein S4e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTS2_9EURY
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
30S ribosomal protein S4e
sw_10_scaffold_1863_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5847..6266)
DNA (420bp) protein (140aa)
30S ribosomal protein S4e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHG0_9EURY
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
rps4E; 30S ribosomal protein S4
sw_10_scaffold_1863_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(6583..6981)
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MED4_9EURY
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
rpl14p; 50S ribosomal protein L14P
sw_10_scaffold_1863_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(6981..7406)
DNA (426bp) protein (142aa)
30S ribosomal protein S17P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXH6_9EURY
30S ribosomal protein S17P {ECO:0000313|EMBL:EMA49130.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
rps17p; 30S ribosomal protein S17
sw_10_scaffold_1863_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7397..7753)
DNA (357bp) protein (119aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
Ribonuclease P protein component 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU44_9EURY
ribonuclease P protein component 1
sw_10_scaffold_1863_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(7753..7977)
DNA (225bp) protein (75aa)
50S ribosomal protein L29P n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHF6_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
50S ribosomal protein L29P
sw_10_scaffold_1863_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(7977..9098)
DNA (1122bp) protein (374aa)
30S ribosomal protein S3 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUY3_9EURY
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
30S ribosomal protein S3
sw_10_scaffold_1863_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9098..9592)
DNA (495bp) protein (165aa)
50S ribosomal protein L22P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWC8_9EURY
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
50S ribosomal protein L22
Displaying 19 items

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