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sw_10_scaffold_718

Search features with annotation key words

Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_718_1
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1..714)
DNA (714bp) protein (238aa)
5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDA9_9EURY
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase {ECO:0000313|EMBL:AHG01384.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Hal
sw_10_scaffold_718_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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813..1073
DNA (261bp) protein (87aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXD4_HALMD
xylose isomerase
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACV48368.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
sw_10_scaffold_718_3
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1070..1717
DNA (648bp) protein (216aa)
Xylose isomerase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E4J3_9EURY
Xylose isomerase {ECO:0000313|EMBL:ELZ39123.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 1137.;"
AP-endonuclease/AP-lyase
sw_10_scaffold_718_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1987..2727)
DNA (741bp) protein (247aa)
Trehalose utilization protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M002_9EURY
Trehalose utilization protein {ECO:0000313|EMBL:EMA37710.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinens
hypothetical protein rbh
sw_10_scaffold_718_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3094..3603)
DNA (510bp) protein (170aa)
Transposase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6T4_9EURY
Transposase {ECO:0000313|EMBL:EMA53268.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
Transposase and inactivated derivatives-like protein
sw_10_scaffold_718_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3755..4072)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5R1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53267.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_718_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4247..6130
DNA (1884bp) protein (628aa)
Putative DNA helicase Rad25 {ECO:0000256|HAMAP-Rule:MF_01489}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01489};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA/RNA helicase, superfamily ii n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJC7_9EURY
DNA/RNA helicase, superfamily ii
sw_10_scaffold_718_8
unknown

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comp(6370..6612)
DNA (243bp) protein (81aa)

This feature has no annotations

sw_10_scaffold_718_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6891..7652
DNA (762bp) protein (254aa)
IclR family transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGK1_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:EMA44841.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
IclR family transcriptional regulator
sw_10_scaffold_718_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7717..8481
DNA (765bp) protein (255aa)
Cyclase family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGH4_9EURY
Cyclase family protein {ECO:0000313|EMBL:EMA44842.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus D
cyclase family protein
sw_10_scaffold_718_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8559..9779
DNA (1221bp) protein (407aa)
Formyl-CoA transferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9B3_9EURY
Formyl-CoA transferase {ECO:0000313|EMBL:EMA53245.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
CoA transferase
sw_10_scaffold_718_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10392..10754
DNA (363bp) protein (121aa)
carbon monoxide dehydrogenase (EC:1.2.99.2)
Carbon monoxide dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6Q9_9EURY
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:EMA53243.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
Displaying 12 items

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