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sw_10_scaffold_854

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_854_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..551)
DNA (549bp) protein (183aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1227455 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGR9_9EURY
hypothetical protein
sw_10_scaffold_854_2
unknown

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622..939
DNA (318bp) protein (106aa)

This feature has no annotations

sw_10_scaffold_854_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(810..2174)
DNA (1365bp) protein (455aa)
Sodium/calcium exchanger membrane region n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1X7_9EURY
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:EMA51498.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sodium/calcium exchanger membrane region
sw_10_scaffold_854_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2309..3106
DNA (798bp) protein (266aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1227455 species="Archaea; Eurya
shikimate 5-dehydrogenase I alpha (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJM2_9EURY
sw_10_scaffold_854_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3131..3925
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53745.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_854_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3993..4868
DNA (876bp) protein (292aa)
Branched-chain amino acid aminotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9F6_9EURY
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EMA53744.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
class IV aminotransferase
sw_10_scaffold_854_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4898..5314
DNA (417bp) protein (139aa)
Oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N840_9EURY
Oxidoreductase {ECO:0000313|EMBL:EMA53743.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
2Fe-2S ferredoxin
sw_10_scaffold_854_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5359..5655)
DNA (297bp) protein (99aa)
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGU4_9EURY
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon {ECO:0000313|EMBL:EMA44936.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
hypothetical protein
sw_10_scaffold_854_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5728..6453)
DNA (726bp) protein (242aa)
Alanyl-tRNA synthetase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N031_9EURY
Alanyl-tRNA synthetase {ECO:0000313|EMBL:EMA50444.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
threonyl/alanyl tRNA synthetase, SAD
sw_10_scaffold_854_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6519..6992)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYQ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50443.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_854_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7031..7204)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MVI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49606.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_10_scaffold_854_12
unknown

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7263..7421
DNA (159bp) protein (53aa)

This feature has no annotations

sw_10_scaffold_854_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7414..7614
DNA (201bp) protein (67aa)
Ferritin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKW4_9EURY
Ferritin {ECO:0000313|EMBL:EMA45384.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
ferritin Dps family protein
Displaying 13 items

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