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sw_10_scaffold_10383

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_10383_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..155)
DNA (153bp) protein (51aa)
UPF0218 protein ZOD2009_02355 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNF3_9EURY
UPF0218 protein ZOD2009_02355 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pau
hypothetical protein
sw_10_scaffold_10383_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(157..354)
DNA (198bp) protein (66aa)
rpoE2; DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
Transcription elongation factor Spt4 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMM8_NATPD
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomo
sw_10_scaffold_10383_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(355..924)
DNA (570bp) protein (190aa)
rpoE1; DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:CAI50631.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI50631.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit E n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMM7_NATPD
sw_10_scaffold_10383_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(926..1300)
DNA (375bp) protein (125aa)
DUF188 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMM6_NATPD
rpo operon protein
DUF188 family protein {ECO:0000313|EMBL:CAI50632.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_10_scaffold_10383_5
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1297..1470)
DNA (174bp) protein (58aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BGE3_9EURY
Suspect SCG annotation. See neighboring gene [sw_10_scaffold_10383_6].
translation initiation factor 2 subunit gamma
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227490 species="Arc
sw_10_scaffold_10383_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1464..2405)
DNA (942bp) protein (314aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=IF2G_NATPD
tif2g; translation initiation factor IF-2 subunit gamma
Translation initiation factor 2 subunit gamma {ECO:0000255|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000255|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000255|HAMAP-Rule:MF_00119}; TaxID=348780 species="Arch
sw_10_scaffold_10383_7

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2914..3231
DNA (318bp) protein (106aa)
haloacid dehalogenase (EC:3.8.1.2)
Haloacid dehalogenase, type II {ECO:0000313|EMBL:AEN05425.1}; EC=3.8.1.2 {ECO:0000313|EMBL:AEN05425.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Haloacid dehalogenase, type II n=1 Tax=halophilic archaeon DL31 RepID=G2ML24_9ARCH
sw_10_scaffold_10383_8
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3291..3662
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XI37_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY61409.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
Displaying 8 items

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