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sw_11_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 199 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_0_1
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

158..3457
DNA (3300bp) protein (1100aa)
Subtilisin-like serine protease n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R1U4_HALMT
Subtilisin-like serine protease {ECO:0000313|EMBL:AFK18204.2}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (s
aprE; subtilisin-like serine protease
sw_11_scaffold_0_2
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3521..4759)
DNA (1239bp) protein (413aa)
Proteasome-activating nucleotidase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W0N1_9EURY
proteasome-activating nucleotidase
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
sw_11_scaffold_0_3
unknown

Not on your lists

5243..6934
DNA (1692bp) protein (564aa)

This feature has no annotations

sw_11_scaffold_0_4
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7019..8554
DNA (1536bp) protein (512aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DDY2_9EURY
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ELZ33680.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
methyl-accepting chemotaxis sensory transducer
sw_11_scaffold_0_5
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8621..9733
DNA (1113bp) protein (371aa)
Ferredoxin n=1 Tax=Natronococcus occultus SP4 RepID=L0JY77_9EURY
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AGB36783.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_11_scaffold_0_6
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9746..10615)
DNA (870bp) protein (290aa)
succinyl-CoA ligase [ADP-forming] alpha chain (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Halobacterium sp. DL1 RepID=G4IHE5_9EURY
sw_11_scaffold_0_7
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10622..11818)
DNA (1197bp) protein (399aa)
succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SUCC_NATPD
sw_11_scaffold_0_8
unknown

Not on your lists

12024..13232
DNA (1209bp) protein (403aa)

This feature has no annotations

sw_11_scaffold_0_9
unknown

Not on your lists

comp(13043..13930)
DNA (888bp) protein (296aa)

This feature has no annotations

sw_11_scaffold_0_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14034..14696)
DNA (663bp) protein (221aa)
NADPH-dependent F420 reductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQR4_9EURY
NADPH-dependent F420 reductase
NADPH-dependent F420 reductase {ECO:0000313|EMBL:ACV46440.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muko
sw_11_scaffold_0_11
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14811..15071)
DNA (261bp) protein (87aa)
Uridine kinase {ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825};; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.
Uridine kinase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ALL8_NATGS
uridine kinase
sw_11_scaffold_0_12
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15184..15642
DNA (459bp) protein (153aa)
Heat shock protein Hsp20 n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AV73_9EURY
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:ELZ02217.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 1099
sw_11_scaffold_0_13
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


16070..18991
DNA (2922bp) protein (974aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:ELY87464.1};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1230
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZM81_9EURY
sw_11_scaffold_0_14
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19287..20321)
DNA (1035bp) protein (345aa)
ornithine cyclodeaminase (EC:4.3.1.12)
Alanine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00935}; Short=AlaDH {ECO:0000256|HAMAP-Rule:MF_00935};; EC=1.4.1.1 {ECO:0000256|HAMAP-Rule:MF_00935};; TaxID=543526 species="Archaea; Euryarchaeota; Ha
Alanine dehydrogenase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RRQ5_HALTV
sw_11_scaffold_0_15
unknown

Not on your lists

comp(20418..20810)
DNA (393bp) protein (131aa)

This feature has no annotations

sw_11_scaffold_0_16
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21188..22789)
DNA (1602bp) protein (534aa)
Thermosome n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W919_9EURY
thermosome
Thermosome {ECO:0000313|EMBL:AGN01129.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_11_scaffold_0_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23433..24950)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITA6_NATPD
hypothetical protein
UCP012666 family protein {ECO:0000313|EMBL:CAI48628.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (s
sw_11_scaffold_0_18
unknown

Not on your lists

comp(24996..25289)
DNA (294bp) protein (98aa)

This feature has no annotations

sw_11_scaffold_0_19
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25494..25712
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:ELY55917.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
sw_11_scaffold_0_20
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(25739..26287)
DNA (549bp) protein (183aa)
RNA-processing protein n=1 Tax=Halomicrobium katesii RepID=UPI00037F54E4
KH domain-containing protein
KH domain protein {ECO:0000313|EMBL:AFZ72930.1}; RNA-processing protein {ECO:0000313|EMBL:ELY69922.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronob
sw_11_scaffold_0_21
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26421..27629)
DNA (1209bp) protein (403aa)
Tryptophanyl-tRNA ligase {ECO:0000313|EMBL:ELY65871.1}; EC=6.1.1.2 {ECO:0000313|EMBL:ELY65871.1};; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;
Tryptophanyl-tRNA ligase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XWR2_9EURY
tryptophanyl-tRNA synthetase
sw_11_scaffold_0_22

Not on your lists

comp(27839..28186)
DNA (348bp) protein (116aa)
Branched-chain amino acid transport n=1 Tax=halophilic archaeon DL31 RepID=G2MJK5_9ARCH
branched-chain amino acid transport
Branched-chain amino acid transport {ECO:0000313|EMBL:AEN04906.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_11_scaffold_0_23

Not on your lists

comp(28183..29058)
DNA (876bp) protein (292aa)
AzlC family protein n=1 Tax=halophilic archaeon DL31 RepID=G2MJK4_9ARCH
AzlC family protein
AzlC family protein {ECO:0000313|EMBL:AEN04905.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_11_scaffold_0_24
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29055..30041)
DNA (987bp) protein (329aa)
rio1, pkn2; RIO-type serine/threonine protein kinase (EC:2.7.11.1)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E4Q4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ41359.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
sw_11_scaffold_0_25
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30105..30401)
DNA (297bp) protein (99aa)
Translation initiation factor 1A n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VWY5_9EURY
translation initiation factor IF-1A
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialb
sw_11_scaffold_0_26
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30529..30939
DNA (411bp) protein (137aa)
Putative membrane protein (DUF2078) {ECO:0000313|EMBL:ERH13512.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
sw_11_scaffold_0_27
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30979..31176
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DB99_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH35875.1}; Flags: Precursor;; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanadu
sw_11_scaffold_0_28
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31352..32713)
DNA (1362bp) protein (454aa)
Sulfatase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HQ72_9EURY
Sulfatase {ECO:0000313|EMBL:ELZ86641.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
type I phosphodiesterase/nucleotide pyrophosphatase
sw_11_scaffold_0_29
unknown

Not on your lists

comp(32750..32863)
DNA (114bp) protein (38aa)

This feature has no annotations

sw_11_scaffold_0_30
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32966..33499)
DNA (534bp) protein (178aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1333523 species="Ar
Inorganic pyrophosphatase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W5L5_9EURY
inorganic pyrophosphatase
Displaying items 1-30 of 199 in total

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