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sw_11_scaffold_1009

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1009_1
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(60..392)
DNA (333bp) protein (111aa)
Cytochrome c oxidase subunit I n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A4N0_9EURY
cytochrome c oxidase subunit I
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:ELY93700.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 1
sw_11_scaffold_1009_2

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563..1135
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XWA9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS04491.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_11_scaffold_1009_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1394..1825)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NGR9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55870.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_11_scaffold_1009_4
unknown

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2102..2407
DNA (306bp) protein (102aa)

This feature has no annotations

sw_11_scaffold_1009_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2507..3175
DNA (669bp) protein (223aa)
DNA polymerase sliding clamp n=1 Tax=halophilic archaeon J07HX64 RepID=U1QTB0_9EURY
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=797114 species="Archa
DNA polymerase sliding clamp
sw_11_scaffold_1009_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3228..3716
DNA (489bp) protein (163aa)
hypothetical protein id=24655195 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG88708.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_11_scaffold_1009_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4025..4612
DNA (588bp) protein (196aa)
DNA primase large subunit PriL n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1B4_HALMD
DNA primase, large subunit
DNA primase large subunit PriL {ECO:0000256|HAMAP-Rule:MF_00701}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
sw_11_scaffold_1009_8
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4588..4731
DNA (144bp) protein (48aa)
DNA primase large subunit PriL n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KX00_9EURY
DNA primase
DNA primase large subunit PriL {ECO:0000256|HAMAP-Rule:MF_00701}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispa
sw_11_scaffold_1009_9

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comp(4713..4937)
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5UYQ7_HALMA
Uncharacterized protein {ECO:0000313|EMBL:ESS12032.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_11_scaffold_1009_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5087..5509
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D353_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29283.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_11_scaffold_1009_11

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comp(5538..6008)
DNA (471bp) protein (157aa)
Holliday junction resolvase Hjc {ECO:0000256|HAMAP-Rule:MF_01490}; Short=Hjc {ECO:0000256|HAMAP-Rule:MF_01490};; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_01490};; TaxID=1412872 species="Archaea; environ
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SH24_9EURY
resolvase, Holliday junction-type
sw_11_scaffold_1009_12
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6041..7465
DNA (1425bp) protein (475aa)
MATE efflux family protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZCE5_9EURY
MATE efflux family protein {ECO:0000313|EMBL:ELY84054.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;
MATE efflux family protein
sw_11_scaffold_1009_13
unknown

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7465..8220
DNA (756bp) protein (252aa)

This feature has no annotations

sw_11_scaffold_1009_14
unknown

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comp(8124..9302)
DNA (1179bp) protein (393aa)

This feature has no annotations

sw_11_scaffold_1009_15
unknown

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10093..10359
DNA (267bp) protein (89aa)

This feature has no annotations

sw_11_scaffold_1009_16
unknown

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10590..12833
DNA (2244bp) protein (748aa)

This feature has no annotations

sw_11_scaffold_1009_17
Caldithrix abyssi, Caldithrix, Bacteria

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12773..13495
DNA (723bp) protein (241aa)
SSS sodium solute transporter superfamily n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTZ7_9BACT
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:EHO40440.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
sodium/proline symporter
sw_11_scaffold_1009_18
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

13905..14063
DNA (159bp) protein (53aa)
Uncharacterized protein n=5 Tax=Leptospira RepID=J4T1S7_9LEPT
Toxin-antitoxin system, antitoxin component, PHD family Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
Phd_YefM
Displaying 18 items

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