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sw_11_scaffold_1010

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1010_1
unknown

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2..67
DNA (66bp) protein (22aa)

This feature has no annotations

sw_11_scaffold_1010_2
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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67..1425
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SUD6_NATMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD05194.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 4309
sw_11_scaffold_1010_3
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1516..2790
DNA (1275bp) protein (425aa)
DNA modification methylase n=2 Tax=Halarchaeum acidiphilum RepID=U3A4D6_9EURY
DNA modification methylase {ECO:0000313|EMBL:GAD52504.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
DNA methylase N-4/N-6 domain-containing protein
sw_11_scaffold_1010_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3047..3361)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2Z0_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47462.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_11_scaffold_1010_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3416..4219
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSY2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25768.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_11_scaffold_1010_6
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4216..5670
DNA (1455bp) protein (485aa)
acetyl-CoA hydrolase (EC:3.1.2.1)
Succinate CoA transferase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GV14_9EURY
Succinate CoA transferase {ECO:0000313|EMBL:ELZ75423.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;
sw_11_scaffold_1010_7
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5817..6935
DNA (1119bp) protein (373aa)
adhC; zinc-binding dehydrogenase / S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TZI2_9EURY
Aryl-alcohol dehydrogenase {ECO:0000313|EMBL:ELZ19754.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13
sw_11_scaffold_1010_8
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6991..8733
DNA (1743bp) protein (581aa)
UvrABC system protein C n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JX68_9EURY
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=662476 species="Ar
uvrC; excinuclease ABC subunit C
sw_11_scaffold_1010_9
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8922..9575
DNA (654bp) protein (218aa)
UDP-glucose 4-epimerase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LD32_HALJP
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA30354.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
UDP-glucose 4-epimerase
sw_11_scaffold_1010_10
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9664..10905
DNA (1242bp) protein (414aa)
N-carbamoyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:ADE01792.1}; EC=3.5.1.- {ECO:0000313|EMBL:ADE01792.1};; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacac
N-carbamoyl-L-amino acid amidohydrolase n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQX2_HALVD
amaB2; N-carbamoyl-L-amino acid amidohydrolase
sw_11_scaffold_1010_11
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11045..11344
DNA (300bp) protein (100aa)
Asparaginase {ECO:0000313|EMBL:ELY31423.1}; Asparaginase family protein {ECO:0000313|EMBL:ADE01867.1}; EC=3.5.1.1 {ECO:0000313|EMBL:ADE01867.1};; TaxID=309800 species="Archaea; Euryarchaeota; Halobact
Asparaginase n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQY0_HALVD
ansB; asparaginase
sw_11_scaffold_1010_12
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(11698..13068)
DNA (1371bp) protein (457aa)
D-hydantoinase {ECO:0000313|EMBL:AJR18778.1}; EC=3.5.2.2 {ECO:0000313|EMBL:AJR18778.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Noc
D-hydantoinase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K2X5_CLOPA
amidohydrolase
sw_11_scaffold_1010_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13205..13738)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SWB6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46720.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_11_scaffold_1010_trna_1
unknown

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comp(13539..13611)
DNA (73bp)
transferRNA
Displaying 14 items

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