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sw_11_scaffold_1188

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1188_1
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1..1173
DNA (1173bp) protein (391aa)
ABC transporter n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BW99_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ15296.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
ABC transporter
sw_11_scaffold_1188_2
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1115..1951
DNA (837bp) protein (279aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NT92_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EMA59845.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubr
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
sw_11_scaffold_1188_3
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1989..2837)
DNA (849bp) protein (283aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NQ08_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EMA59846.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubr
binding-protein-dependent transport systems inner membrane component
sw_11_scaffold_1188_4
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2834..3976)
DNA (1143bp) protein (381aa)
NMT1/THI5 like domain-containing protein n=1 Tax=Halorubrum lipolyticum DSM 21995 PF8_9EURY">RepID=M0NPF8_9EURY
NMT1/THI5 like domain-containing protein {ECO:0000313|EMBL:EMA59847.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lip
NMT1/THI5 like domain-containing protein
sw_11_scaffold_1188_5
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4061..4294)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A499_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY92732.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989
hypothetical protein
sw_11_scaffold_1188_6
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4303..5283)
DNA (981bp) protein (327aa)
NMT1/THI5 like domain-containing protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BYX3_9EURY
NMT1/THI5 like domain-containing protein {ECO:0000313|EMBL:ELZ15297.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
sw_11_scaffold_1188_7
unknown

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comp(5572..5661)
DNA (90bp) protein (30aa)

This feature has no annotations

sw_11_scaffold_1188_8

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comp(5658..6053)
DNA (396bp) protein (132aa)
Sodium/calcium exchanger membrane region n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RWI4_HALTV
Marine sediment metagenome DNA, contig: S06H3_L00332 {ECO:0000313|EMBL:GAI07548.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
sodium/calcium exchanger membrane region
sw_11_scaffold_1188_9
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6080..6769)
DNA (690bp) protein (230aa)
Sodium/calcium exchanger membrane region n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BYX9_9EURY
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:ELZ15302.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
sodium/calcium exchanger membrane region
sw_11_scaffold_1188_10

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comp(6873..8264)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4YBQ0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS08532.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_11_scaffold_1188_11
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8266..9420)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1NQZ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH06245.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
hypothetical protein
sw_11_scaffold_1188_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9527..10183)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZGV6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59930.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
Signal peptidase I-like protein
sw_11_scaffold_1188_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10217..11926)
DNA (1710bp) protein (570aa)
uvrD; repair helicase (EC:3.6.1.-)
UvrD/REP helicase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D125_9EURY
UvrD/REP helicase {ECO:0000313|EMBL:ELZ27854.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
Displaying 13 items

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