ggKbase home page

sw_11_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 75 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_12_1
unknown

Not on your lists

1..90
DNA (90bp) protein (30aa)

This feature has no annotations

sw_11_scaffold_12_2

Not on your lists

569..1327
DNA (759bp) protein (253aa)
biotin/acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
BirA, biotin-[acetyl-CoA-carboxylase] ligase region n=1 Tax=uncultured archaeon A07HR67 RepID=V4XY67_9ARCH
BirA, biotin-[acetyl-CoA-carboxylase] ligase region {ECO:0000313|EMBL:ESS05166.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_11_scaffold_12_3
unknown

Not on your lists

comp(1392..1556)
DNA (165bp) protein (55aa)

This feature has no annotations

sw_11_scaffold_12_4
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2005..3273)
DNA (1269bp) protein (423aa)
Metal-dependent phosphohydrolase HD sub domain protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CG65_9EURY
Metal-dependent phosphohydrolase HD sub domain protein {ECO:0000313|EMBL:ELZ20874.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source=
metal dependent phosphohydrolase
sw_11_scaffold_12_5
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3467..4132
DNA (666bp) protein (222aa)
cyclase family protein id=24624483 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Putative metal-dependent hydrolase {ECO:0000313|EMBL:ERG99877.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp.
hypothetical protein
sw_11_scaffold_12_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4337..5278
DNA (942bp) protein (314aa)
hypothetical protein id=24656045 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG89390.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_11_scaffold_12_7
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5522..5851
DNA (330bp) protein (110aa)
Cupin domain protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1QR08_9EURY
Cupin domain protein {ECO:0000313|EMBL:ERH08122.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
cupin 2 barrel domain protein
sw_11_scaffold_12_8
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6282..7217)
DNA (936bp) protein (312aa)
IS1341-type transposase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A1U0_9EURY
IS1341-type transposase {ECO:0000313|EMBL:ELY91807.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
transposase, IS605 OrfB family
sw_11_scaffold_12_9
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7189..7323)
DNA (135bp) protein (45aa)
Transposase, IS605 OrfB family n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWB0_HALLT
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:ACM58500.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi
sw_11_scaffold_12_10
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7485..8276)
DNA (792bp) protein (264aa)
short-chain dehydrogenase/reductase SDR id=24656044 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Dehydrogenase {ECO:0000313|EMBL:ERG89389.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
short-chain dehydrogenase/reductase SDR
sw_11_scaffold_12_11

Not on your lists

comp(8556..9047)
DNA (492bp) protein (164aa)
Plastocyanin n=1 Tax=uncultured archaeon A07HB70 RepID=V4XBJ4_9ARCH
Plastocyanin {ECO:0000313|EMBL:ESS05264.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hcpC; halocyanin
sw_11_scaffold_12_12
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9171..10223
DNA (1053bp) protein (351aa)
ATPase-like, ParA/MinD n=1 Tax=Halobacterium sp. DL1 RepID=G4IBK2_9EURY
ATP-binding protein {ECO:0000313|EMBL:AHG04173.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
ParA/MinD ATPase-like protein
sw_11_scaffold_12_13
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10506..11123
DNA (618bp) protein (206aa)
Uracil-DNA glycosylase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XJE9_9EURY
Uracil-DNA glycosylase {ECO:0000313|EMBL:ELY61889.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongol
uracil-DNA glycosylase-like protein
sw_11_scaffold_12_14
unknown

Not on your lists

comp(11157..11369)
DNA (213bp) protein (71aa)

This feature has no annotations

sw_11_scaffold_12_15
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11446..12228
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G3N3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ81688.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
hypothetical protein
sw_11_scaffold_12_16
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

15588..16355
DNA (768bp) protein (256aa)
hypothetical protein id=18315796 bin=Nanosalinarum tax=Nanosalinarum
Uncharacterized protein {ECO:0000313|EMBL:EGQ39592.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
hypothetical protein
sw_11_scaffold_12_17
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16363..17052)
DNA (690bp) protein (230aa)
Site-specific recombinase xerd n=1 Tax=Halorubrum sp. AJ67 RepID=V6DRV7_9EURY
Site-specific recombinase xerd {ECO:0000313|EMBL:CDK38901.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
site-specific recombinase xerd
sw_11_scaffold_12_trna_1
unknown

Not on your lists

17195..17278
DNA (84bp)
transferRNA
sw_11_scaffold_12_18
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17447..17872
DNA (426bp) protein (142aa)
Response regulator receiver protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XJU5_9EURY
Response regulator receiver protein {ECO:0000313|EMBL:ELY62024.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobiu
response regulator receiver protein
sw_11_scaffold_12_19
unknown

Not on your lists

comp(17876..18082)
DNA (207bp) protein (69aa)

This feature has no annotations

sw_11_scaffold_12_20
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18170..18403
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Halovivax RepID=L0ID59_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ14233.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
sw_11_scaffold_12_21
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18704..19879
DNA (1176bp) protein (392aa)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQY1_NATM8
livJ1; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ36589.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteri
sw_11_scaffold_12_22
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19966..20736
DNA (771bp) protein (257aa)
hypothetical protein id=24654768 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG89715.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_11_scaffold_12_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20811..21590)
DNA (780bp) protein (260aa)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y284_NATM8
livF1; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ36590.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
sw_11_scaffold_12_24
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21587..22513)
DNA (927bp) protein (309aa)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XR21_NATM8
livG1; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ36591.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
sw_11_scaffold_12_25
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22506..23927)
DNA (1422bp) protein (474aa)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQY8_NATM8
livM1; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ36592.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
sw_11_scaffold_12_26
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23924..24982)
DNA (1059bp) protein (353aa)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKV8_NATM8
livH1; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ36593.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
sw_11_scaffold_12_27
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25169..26413
DNA (1245bp) protein (415aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1227500 species="Archaea;
Phosphoglycerate kinase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WRU9_9EURY
3-phosphoglycerate kinase
sw_11_scaffold_12_28
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26417..26977
DNA (561bp) protein (187aa)
GCN5-related N-acetyltransferase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PDL3_9EURY
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EMA67609.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense
GCN5-related N-acetyltransferase
sw_11_scaffold_12_29
unknown

Not on your lists

comp(27310..27474)
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying items 1-30 of 75 in total

View Taxonomy