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sw_11_scaffold_1355

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1355_1
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..316)
DNA (315bp) protein (105aa)
IS1341-type transposase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JTX8_9EURY
IS1341-type transposase {ECO:0000313|EMBL:EMA11833.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
transposase
sw_11_scaffold_1355_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(663..1724)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TTR3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC40526.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_11_scaffold_1355_3
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1805..2389)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LL96_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC40536.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_11_scaffold_1355_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2452..2625)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MYE6_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA50616.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
sw_11_scaffold_1355_5
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3102..3488)
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=M0JLN1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA14949.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_11_scaffold_1355_6
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3536..4249)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FH73_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ59391.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_11_scaffold_1355_7
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4554..6227
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LGT9_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC39641.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_11_scaffold_1355_8
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6439..7980
DNA (1542bp) protein (514aa)
Cell surface glycoprotein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JN12_9EURY
Cell surface glycoprotein {ECO:0000313|EMBL:EMA09753.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATC
probable cell surface glycoprotein
sw_11_scaffold_1355_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7964..9097
DNA (1134bp) protein (378aa)
lepW2; probable S26 type signal peptidase I (EC:3.4.21.89)
Probable S26 type signal peptidase I n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LGT6_HALWC
Peptidase S26 domain protein {ECO:0000313|EMBL:CCC39638.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (s
sw_11_scaffold_1355_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9097..10257
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LGT5_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC39637.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_11_scaffold_1355_11
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10272..10430)
DNA (159bp) protein (53aa)
Transcriptional regulator, TrmB n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E444_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ELZ41139.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovoru
transcriptional regulator, TrmB
sw_11_scaffold_1355_12
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10433..10825)
DNA (393bp) protein (131aa)
Transcriptional regulator, TrmB n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PC05_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EMA67059.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM
transcriptional regulator, TrmB
sw_11_scaffold_1355_13
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11147..12298)
DNA (1152bp) protein (384aa)
lepW1; S26 type signal peptidase I (EC:3.4.21.89); K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] id=24629953 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
lepW1; probable S26 type signal peptidase I (EC:3.4.21.89)
Signal peptidase I, archaeal type {ECO:0000313|EMBL:ERG94596.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum wals
sw_11_scaffold_1355_14
unknown

Not on your lists

comp(13018..13122)
DNA (105bp) protein (35aa)

This feature has no annotations

sw_11_scaffold_1355_15
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13125..13535)
DNA (411bp) protein (137aa)
Transposase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JAB3_HALVA
Transposase {ECO:0000313|EMBL:EMA04655.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;"
transposase IS4 family protein
sw_11_scaffold_1355_16
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13895..15985)
DNA (2091bp) protein (697aa)
HTR-like protein n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0HV86_9EURY
HTR-like protein {ECO:0000313|EMBL:ELZ87029.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717.;"
HTR-like protein
sw_11_scaffold_1355_17
unknown

Not on your lists

16237..16500
DNA (264bp) protein (88aa)

This feature has no annotations

sw_11_scaffold_1355_18
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16651..16914
DNA (264bp) protein (88aa)
PAS sensor histidine kinase {ECO:0000313|EMBL:ERH05784.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
PAS sensor protein id=24618176 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
pas domain s-box
sw_11_scaffold_1355_19
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16984..18522
DNA (1539bp) protein (513aa)
Pas domain s-box n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HHJ2_9EURY
Pas domain s-box {ECO:0000313|EMBL:ELZ83207.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
pas domain s-box
sw_11_scaffold_1355_20
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18564..18842)
DNA (279bp) protein (93aa)
PAS sensor histidine kinase n=2 Tax=Halonotius RepID=U1NX75_9EURY
PAS sensor histidine kinase {ECO:0000313|EMBL:ERH05504.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
protein kinase
sw_11_scaffold_1355_21
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18895..19140)
DNA (246bp) protein (82aa)
Putative transposase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V7G0_HALMA
tnp; putative transposase
Putative transposase {ECO:0000313|EMBL:AAV44554.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (strain
sw_11_scaffold_1355_22
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19273..19782)
DNA (510bp) protein (170aa)
Nitrilase protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T0V1_ALCXX
Nitrilase protein {ECO:0000313|EMBL:EGP46030.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis A
Nitrilase
Displaying 22 items

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