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sw_11_scaffold_1364

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1364_1
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

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1..204
DNA (204bp) protein (68aa)
Peptidase S16, lon domain protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RRW4_9RHOB
ATP-dependent protease Tax=RBG_16_Chloroflexi_48_8_curated
ATP-dependent protease
sw_11_scaffold_1364_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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404..1261
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B48898
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46099.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_1364_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1551..2279
DNA (729bp) protein (243aa)
Thiamine pyrophosphate-requiring protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPK8_9BURK
Thiamine pyrophosphate-requiring protein {ECO:0000313|EMBL:EGJ10276.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatily
putative acetolactate synthase large subunit
sw_11_scaffold_1364_4
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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2301..2921
DNA (621bp) protein (207aa)
acetolactate synthase (EC:2.2.1.6)
acetolactate synthase large subunit id=1697118 bin=GWA2__Bacteriovorax-rel_49_15 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
ilvI; acetolactate synthase large subunit Tax=GWA2_Bdellovibrionales_49_15_curated
sw_11_scaffold_1364_5
uncultured Chloroflexi bacterium, Chloroflexi, Bacteria

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2967..3494
DNA (528bp) protein (176aa)
Transposase n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SCW1_9CHLR
Transposase {ECO:0000313|EMBL:BAL53997.1}; TaxID=166587 species="Bacteria; Chloroflexi; environmental samples.;" source="uncultured Chloroflexi bacterium.;"
putative transposase
sw_11_scaffold_1364_6

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3476..4054
DNA (579bp) protein (193aa)
Transposase n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SCW2_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKL58056.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase
sw_11_scaffold_1364_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4615..4950
DNA (336bp) protein (112aa)
yajC; Preprotein translocase subunit YajC
yajC; Preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC id=24656822 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Preprotein translocase subunit YajC {ECO:0000313|EMBL:CBH22933.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_11_scaffold_1364_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5003..6232
DNA (1230bp) protein (410aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II {ECO:0000313|EMBL:ABC43759.1}; EC=3.5.4.25 {ECO:0000313|EMBL:ABC43759.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroide
Riboflavin biosynthesis protein ribA n=2 Tax=Salinibacter ruber RepID=D5H4H9_SALRM
ribA; riboflavin biosynthesis protein ribA
sw_11_scaffold_1364_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(7144..9483)
DNA (2340bp) protein (780aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4I1_SALRM
ComEC; DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:CBH22936.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
sw_11_scaffold_1364_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9771..10253
DNA (483bp) protein (161aa)
nusB; N utilization substance protein B-like protein
nusB; N utilization substance protein B-like protein; K03625 N utilization substance protein B id=24656826 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=761659 species="Bacteria; Bacte
sw_11_scaffold_1364_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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10362..11021
DNA (660bp) protein (220aa)
pphA; Serine/threonine protein phosphatase 1; K07313 serine/threonine protein phosphatase 1 [EC:3.1.3.16] id=24656827 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Serine/threonine protein phosphatase 1 {ECO:0000313|EMBL:CBH22938.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CBH22938.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
pphA; Serine/threonine protein phosphatase 1
sw_11_scaffold_1364_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11114..12211
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4I4_SALRM
hypothetical protein
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_11_scaffold_1364_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12314..13204
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4I5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22940.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_1364_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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13282..14541
DNA (1260bp) protein (420aa)
Lipoprotein releasing system transmembrane protein lolC n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4I6_SALRM
lolC; Lipoprotein releasing system transmembrane protein lolC
Lipoprotein releasing system transmembrane protein lolC {ECO:0000313|EMBL:CBH22941.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
sw_11_scaffold_1364_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14646..14990
DNA (345bp) protein (115aa)
comA; phosphosulfolactate synthase; K08097 phosphosulfolactate synthase [EC:4.4.1.19] id=24656831 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphosulfolactate synthase {ECO:0000313|EMBL:CBH22942.1}; EC=4.4.1.19 {ECO:0000313|EMBL:CBH22942.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
comA; phosphosulfolactate synthase
sw_11_scaffold_1364_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14959..15432
DNA (474bp) protein (158aa)
comA; phosphosulfolactate synthase; K08097 phosphosulfolactate synthase [EC:4.4.1.19] id=24656831 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphosulfolactate synthase {ECO:0000313|EMBL:CBH22942.1}; EC=4.4.1.19 {ECO:0000313|EMBL:CBH22942.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
comA; phosphosulfolactate synthase
sw_11_scaffold_1364_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


15624..15860
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Salisaeta longa RepID=UPI0003B5C609
rpmB; 50S ribosomal protein L28
50S Ribosomal protein L28 {ECO:0000313|EMBL:CBH22943.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_11_scaffold_1364_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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15920..16084
DNA (165bp) protein (55aa)
rpmG; 50S ribosomal protein L33
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 id=24656833 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_11_scaffold_1364_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16088..16240
DNA (153bp) protein (51aa)
hypothetical protein
hypothetical protein id=24656834 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH22945.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_1364_trna_1
unknown

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16275..16348
DNA (74bp)
transferRNA
sw_11_scaffold_1364_20
unknown

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comp(16487..17107)
DNA (621bp) protein (207aa)

This feature has no annotations

sw_11_scaffold_1364_trna_2
unknown

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16936..17006
DNA (71bp)
transferRNA
sw_11_scaffold_1364_21
unknown

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17139..17441
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying 23 items

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