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sw_11_scaffold_1517

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1517_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..1303
DNA (1302bp) protein (434aa)
hsdM; Type I restriction modification enzyme, M subunit (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72] id=24615213 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
N-6 DNA methylase {ECO:0000313|EMBL:ESP88377.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum ty
N-6 DNA methylase
sw_11_scaffold_1517_2
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1296..2582
DNA (1287bp) protein (429aa)
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:AKB65200.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AKB65200.1};; TaxID=213585 species="Archaea; Euryarchaeota; Methanomicrobia;
Restriction endonuclease S subunits (EC:3.1.21.3)
Restriction endonuclease S subunits n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MIQ6_9FIRM
sw_11_scaffold_1517_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2575..4788
DNA (2214bp) protein (738aa)
rmeR; type I site-specific deoxyribonuclease subunit rmeR; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] id=24615211 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
rmeR1; type I site-specific deoxyribonuclease subunit RmeR (EC:3.1.21.3)
Type I site-specific deoxyribonuclease subunit rmeR {ECO:0000313|EMBL:ESP88375.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.
sw_11_scaffold_1517_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5021..5527
DNA (507bp) protein (169aa)
rmeR2; type I site-specific deoxyribonuclease subunit rmeR (EC:3.1.21.3)
Type I site-specific deoxyribonuclease subunit rmeR n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HCG5_9EURY
Type I site-specific deoxyribonuclease subunit rmeR {ECO:0000313|EMBL:ESP88375.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.
sw_11_scaffold_1517_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5529..6239
DNA (711bp) protein (237aa)
hypothetical protein; K07043 id=24615210 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88374.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_11_scaffold_1517_6
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6192..6611)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V780_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV44656.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_11_scaffold_1517_7
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6682..8016)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQA7_HALVD
Uncharacterized protein {ECO:0000313|EMBL:ADE01686.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
hypothetical protein
sw_11_scaffold_1517_8
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8009..11794)
DNA (3786bp) protein (1262aa)
Uncharacterized protein n=2 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQA6_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE01756.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
sw_11_scaffold_1517_9
unknown

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comp(11980..12099)
DNA (120bp) protein (40aa)

This feature has no annotations

sw_11_scaffold_1517_10
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12395..12706
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JR02_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA10075.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_11_scaffold_1517_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12749..13681)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKR4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46261.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
Displaying 11 items

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