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sw_11_scaffold_1543

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1543_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..242
DNA (240bp) protein (80aa)
MoxR-like ATPase n=1 Tax=halophilic archaeon J07HX64 RepID=U1P150_9EURY
MoxR-like ATPase {ECO:0000313|EMBL:ERH10340.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
ATPase
sw_11_scaffold_1543_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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536..1792
DNA (1257bp) protein (419aa)
Succinate dehydrogenase subunit A {ECO:0000313|EMBL:ERH08544.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ERH08544.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halo
sdhA2; succinate dehydrogenase subunit A (flavoprotein) (EC:1.3.99.1)
Succinate dehydrogenase subunit A n=1 Tax=halophilic archaeon J07HX64 RepID=U1PEP7_9EURY
sw_11_scaffold_1543_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1810..2193
DNA (384bp) protein (128aa)
Succinate dehydrogenase subunit A {ECO:0000313|EMBL:ERH08544.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ERH08544.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halo
succinate dehydrogenase (EC:1.3.99.1)
Succinate dehydrogenase subunit A n=1 Tax=halophilic archaeon J07HX64 RepID=U1PEP7_9EURY
sw_11_scaffold_1543_4
unknown

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comp(2202..2483)
DNA (282bp) protein (94aa)

This feature has no annotations

sw_11_scaffold_1543_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2830..3444
DNA (615bp) protein (205aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
lip; lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] id=24644317 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
lipA; lipoyl synthase (EC:2.8.1.8)
sw_11_scaffold_1543_6
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4016..5419
DNA (1404bp) protein (468aa)
Twin-arginine translocation pathway signal protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L5U7_9EURY
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:EMA27365.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobi
twin-arginine translocation pathway signal protein
sw_11_scaffold_1543_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5409..6380
DNA (972bp) protein (324aa)
binding-protein-dependent transport system inner membrane protein id=24650108 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERH11191.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;
binding-protein-dependent transport system inner membrane protein
sw_11_scaffold_1543_8
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6381..7268
DNA (888bp) protein (296aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L1C9_9EURY
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:EMA27367.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;"
binding-protein-dependent transport system inner membrane protein
sw_11_scaffold_1543_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7349..7819)
DNA (471bp) protein (157aa)
Phenol hydroxylase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LPL4_9EURY
Phenol hydroxylase {ECO:0000313|EMBL:EMA35487.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
phenol hydroxylase
sw_11_scaffold_1543_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7821..8333
DNA (513bp) protein (171aa)
ugpC3; sugar ABC transporter ATP-binding protein id=24647020 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ERH11189.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
tsgD7; sugar ABC transporter ATP-binding protein
sw_11_scaffold_1543_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8399..8926)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INF7_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50346.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_1543_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9432..10199
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0C7_HALMD
translation-associated GTPase
Uncharacterized protein {ECO:0000313|EMBL:ACV48919.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_11_scaffold_1543_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10313..11182)
DNA (870bp) protein (290aa)
succinyl-CoA synthetase subunit alpha; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] id=24647648 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
succinyl-CoA synthetase subunit alpha
sw_11_scaffold_1543_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11190..12326)
DNA (1137bp) protein (379aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=halophilic archaeon J07HX64 RepID=U1NXB8_9EURY
sw_11_scaffold_1543_15
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12497..13198)
DNA (702bp) protein (234aa)
Membrane protein-like protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LN87_HALLT
membrane protein-like protein
Membrane protein-like protein {ECO:0000313|EMBL:ACM56825.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (
Displaying 15 items

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