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sw_11_scaffold_1555

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1555_1
unknown

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161..388
DNA (228bp) protein (76aa)

This feature has no annotations

sw_11_scaffold_1555_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(357..653)
DNA (297bp) protein (99aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophi
peptidase M48 Ste24p id=24648850 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
peptidase M48 Ste24p
sw_11_scaffold_1555_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1571..2479
DNA (909bp) protein (303aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=1085028 specie
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PHU0_9EURY
dihydrodipicolinate synthase
sw_11_scaffold_1555_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2476..3186
DNA (711bp) protein (237aa)
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] id=24648848 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102};; TaxID=1085028 spe
dihydrodipicolinate reductase (EC:1.3.1.26)
sw_11_scaffold_1555_5
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3308..4222
DNA (915bp) protein (305aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AEH36979.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AEH36979.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;"
UDP-glucose 4-epimerase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DA53_HALXS
sw_11_scaffold_1555_6
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4304..5593
DNA (1290bp) protein (430aa)
Adenylosuccinate lyase {ECO:0000313|EMBL:EMA71830.1}; EC=4.3.2.2 {ECO:0000313|EMBL:EMA71830.1};; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PSJ2_9EURY
sw_11_scaffold_1555_7
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5617..6264)
DNA (648bp) protein (216aa)
nthA1; DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=24620657 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
nthA1; endonuclease III (EC:4.2.99.18)
Putative endoIII-related endonuclease {ECO:0000313|EMBL:ERH02571.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J0
sw_11_scaffold_1555_8
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6394..6846)
DNA (453bp) protein (151aa)
Hydrogenase accessory protein HypB n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AHR3_NATGS
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:AFZ73346.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium
hydrogenase nickel incorporation protein HypB
sw_11_scaffold_1555_9
unknown

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6882..7613
DNA (732bp) protein (244aa)

This feature has no annotations

sw_11_scaffold_1555_10
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7760..8446
DNA (687bp) protein (229aa)
restriction endonuclease n=1 Tax=Halorubrum sp. T3 RepID=UPI000369124F
Mrr restriction system protein-like protein {ECO:0000313|EMBL:ELZ48854.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
restriction system mrr-like protein
sw_11_scaffold_1555_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8443..8763
DNA (321bp) protein (107aa)
Uncharacterized protein id=24649857 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10935.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_11_scaffold_1555_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8817..9392
DNA (576bp) protein (192aa)
Uncharacterized protein id=24649858 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10936.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_11_scaffold_1555_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9508..10383
DNA (876bp) protein (292aa)
hop; halorhodopsin; K04642 halorhodopsin id=24646773 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Bacteriorhodopsin {ECO:0000313|EMBL:ERH10937.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hop; halorhodopsin
sw_11_scaffold_1555_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10580..10840
DNA (261bp) protein (87aa)
Uncharacterized protein id=24649860 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10938.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_11_scaffold_1555_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11011..12438
DNA (1428bp) protein (476aa)
PAS sensor histidine kinase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PLE8_9EURY
PAS sensor histidine kinase {ECO:0000313|EMBL:ERH10939.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
PAS domain-containing protein
Displaying 15 items

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