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sw_11_scaffold_1564

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1564_1
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2..115)
DNA (114bp) protein (38aa)
nickel-responsive regulator n=1 Tax=Halomicrobium katesii RepID=UPI0003736618
nikR3; NikR family transcription regulator
NikR family transcription regulator {ECO:0000313|EMBL:CCC40256.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum wal
sw_11_scaffold_1564_2
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(214..1002)
DNA (789bp) protein (263aa)
ABC transporter-related protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PGM8_9EURY
ABC transporter-related protein {ECO:0000313|EMBL:EMA69226.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM
ABC transporter-related protein
sw_11_scaffold_1564_3
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(993..1835)
DNA (843bp) protein (281aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HWX5_9EURY
Nitrate ABC transporter permease {ECO:0000313|EMBL:KDE59409.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A
binding-protein-dependent transporters inner membrane component
sw_11_scaffold_1564_4
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1832..2158)
DNA (327bp) protein (109aa)
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein n=2 Tax=Natrinema RepID=I7BW78_NATSJ
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein {ECO:0000313|EMBL:AFO57170.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" s
sw_11_scaffold_1564_5
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2124..2783)
DNA (660bp) protein (220aa)
nitrate ABC transporter substrate-binding protein n=1 Tax=Halomicrobium katesii RepID=UPI00036AF9CE
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein {ECO:0000313|EMBL:ELZ88990.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
sw_11_scaffold_1564_6
unknown

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comp(3038..3277)
DNA (240bp) protein (80aa)

This feature has no annotations

sw_11_scaffold_1564_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3356..3646)
DNA (291bp) protein (97aa)
Transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUY7_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ25709.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
transcriptional regulator
sw_11_scaffold_1564_8
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3649..3963)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BX22_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ14953.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_11_scaffold_1564_9
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4142..4846)
DNA (705bp) protein (235aa)
Abortive infection protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D371_HALXS
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:AEH38503.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DS
sw_11_scaffold_1564_10
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5186..5614)
DNA (429bp) protein (143aa)
Putative nickel-responsive regulator n=4 Tax=Haloferax PF2_HALVD">RepID=D4GPF2_HALVD
CopG family transcripitonal regulator
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. B
sw_11_scaffold_1564_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5916..6875)
DNA (960bp) protein (320aa)
Putative HTH-type transcriptional regulatory protein NP_1320A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Y1320_NATPD
hypothetical protein
Putative HTH-type transcriptional regulatory protein NP_1320A {ECO:0000255|HAMAP-Rule:MF_00584}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronom
sw_11_scaffold_1564_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6896..8275
DNA (1380bp) protein (460aa)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};;
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISY5_NATPD
hypothetical protein
sw_11_scaffold_1564_13
unknown

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8331..8525
DNA (195bp) protein (65aa)

This feature has no annotations

sw_11_scaffold_1564_14
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8522..8830)
DNA (309bp) protein (103aa)
Threonine synthase (EC:4.2.3.1)
Threonine synthase (Fragment) n=1 Tax=halophilic archaeon J07HB67 RepID=U1R080_9EURY
Threonine synthase {ECO:0000313|EMBL:ERH11692.1}; Flags: Fragment;; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
Displaying 14 items

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