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sw_11_scaffold_1969

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1969_1
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1..1368)
DNA (1368bp) protein (456aa)
glycoside hydrolase family 68 (EC:2.4.1.10)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003629FA5
Glycoside hydrolase family 68 {ECO:0000313|EMBL:EMA57027.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DS
sw_11_scaffold_1969_2
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1526..2599
DNA (1074bp) protein (358aa)
Transcriptional regulator, TrmB n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E444_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ELZ41139.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovoru
transcriptional regulator, TrmB
sw_11_scaffold_1969_3
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2646..2936)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PA22_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA66698.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_11_scaffold_1969_4
unknown

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comp(3045..3545)
DNA (501bp) protein (167aa)

This feature has no annotations

sw_11_scaffold_1969_5

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4658..6355
DNA (1698bp) protein (566aa)
oligo-1,6-glucosidase, family GH13 (EC:3.2.1.10)
Glycosidase n=2 Tax=Archaea RepID=V4XSD8_9ARCH
Glycosidase {ECO:0000313|EMBL:ESS11469.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_11_scaffold_1969_6
unknown

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comp(6392..6691)
DNA (300bp) protein (100aa)

This feature has no annotations

sw_11_scaffold_1969_7

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comp(6844..7971)
DNA (1128bp) protein (376aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZLT9_9ARCH
ABC transporter
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ESS03420.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_11_scaffold_1969_8
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7975..8814)
DNA (840bp) protein (280aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PAM8_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA66703.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;"
binding-protein-dependent transporters inner membrane component
sw_11_scaffold_1969_9
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8896..9906)
DNA (1011bp) protein (337aa)
Sugar ABC transporter permease n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E056_9EURY
Sugar ABC transporter permease {ECO:0000313|EMBL:ELZ41136.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum
binding-protein-dependent transporters inner membrane component
sw_11_scaffold_1969_10
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9922..11220)
DNA (1299bp) protein (433aa)
Extracellular solute-binding protein family 1 n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NGE7_9EURY
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EMA57032.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
extracellular solute-binding protein family 1
sw_11_scaffold_1969_11
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11968..12786
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PAX3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA66699.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_11_scaffold_1969_12
unknown

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comp(13137..13208)
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 12 items

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