ggKbase home page

sw_11_scaffold_2022

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_2022_1
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..120
DNA (120bp) protein (40aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:ELY68536.1};; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacter
Tryptophan synthase beta chain n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y4G9_9EURY
tryptophan synthase, beta subunit
sw_11_scaffold_2022_2
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(129..1292)
DNA (1164bp) protein (388aa)
Indoleamine 2,3-dioxygenase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IC08_HALRX
Indoleamine 2,3-dioxygenase
Indoleamine 2,3-dioxygenase {ECO:0000313|EMBL:AGB17110.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 181
sw_11_scaffold_2022_3

Not on your lists

comp(1560..1886)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halorubrum phage CGphi46 RepID=R9TQP5_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:AGN33829.1}; TaxID=754066 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA phages.;" source="Halorubrum phage CGphi46.;"
putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain
sw_11_scaffold_2022_4
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1959..2291)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IH17_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ96060.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
sw_11_scaffold_2022_5
unknown

Not on your lists

comp(2294..2461)
DNA (168bp) protein (56aa)

This feature has no annotations

sw_11_scaffold_2022_6
unknown

Not on your lists

2673..3992
DNA (1320bp) protein (440aa)

This feature has no annotations

sw_11_scaffold_2022_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4234..5355
DNA (1122bp) protein (374aa)
aspB2; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L851_HALJP
Aspartate aminotransferase {ECO:0000313|EMBL:EMA29263.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM
sw_11_scaffold_2022_8
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5392..5601)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 PF52_9EURY">RepID=M0PF52_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA68184.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
sw_11_scaffold_2022_9
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5689..5955)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKG3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ07034.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_11_scaffold_2022_10
unknown

Not on your lists

comp(6016..6315)
DNA (300bp) protein (100aa)

This feature has no annotations

sw_11_scaffold_2022_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6354..6635
DNA (282bp) protein (94aa)
50S ribosomal protein L44e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL44E_NATPD
rpl44e; 50S ribosomal protein L44e
50S ribosomal protein L44e; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATCC 35678 / DSM 2160)
sw_11_scaffold_2022_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6602..6811
DNA (210bp) protein (70aa)
30S ribosomal protein S27e n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NS25_HALBP
30S ribosomal protein S27e
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371, ECO:0000256|RuleBase:RU000671}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.
sw_11_scaffold_2022_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6868..7668
DNA (801bp) protein (267aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISI6_NATPD
tif2a; translation initiation factor IF-2 subunit alpha
Translation initiation factor 2 subunit alpha {ECO:0000256|HAMAP-Rule:MF_00231}; aIF2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; eIF-2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; TaxID=348780 species="Arch
sw_11_scaffold_2022_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7913..8665
DNA (753bp) protein (251aa)
PAC2 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISI3_NATPD
hypothetical protein
PAC2 family protein {ECO:0000313|EMBL:CAI48903.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_11_scaffold_2022_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8713..9336
DNA (624bp) protein (208aa)
Chaperone protein DnaJ n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRQ7_9EURY
Chaperone protein DnaJ {ECO:0000313|EMBL:ELZ25067.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
heat shock protein DnaJ domain-containing protein
sw_11_scaffold_2022_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9333..9545
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQS7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36522.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_11_scaffold_2022_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9635..10246)
DNA (612bp) protein (204aa)
DNA mismatch repair protein MutS n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKI9_NATM8
mutS5b; DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000313|EMBL:CCQ35979.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas mool
sw_11_scaffold_2022_18
unknown

Not on your lists

10299..11573
DNA (1275bp) protein (425aa)

This feature has no annotations

sw_11_scaffold_2022_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11578..12090
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPC9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47228.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
putative ester cyclase
sw_11_scaffold_2022_20
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12112..12660)
DNA (549bp) protein (183aa)
cysE1; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=2 Tax=Haloarcula RepID=M0JQ04_9EURY
Serine acetyltransferase {ECO:0000313|EMBL:EMA10458.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
Displaying 20 items

View Taxonomy