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sw_11_scaffold_2029

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_2029_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..250
DNA (249bp) protein (83aa)
Homolog to ribonuclease R n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITK5_NATPD
ribonuclease R-like protein
Homolog to ribonuclease R {ECO:0000313|EMBL:CAI48528.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (
sw_11_scaffold_2029_2

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313..1851
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MH16_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN06262.1}; Flags: Precursor;; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_11_scaffold_2029_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2055..2576
DNA (522bp) protein (174aa)
ABC transporter ATP-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSJ9_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ25613.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
ABC transporter
sw_11_scaffold_2029_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2573..3712
DNA (1140bp) protein (380aa)
ABC-type transport system permease protein (Probable substrate macrolides) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y4B4_NATM8
ABC-type transport system permease protein (probable substrate macrolides)
ABC-type transport system permease protein (Probable substrate macrolides) {ECO:0000313|EMBL:CCQ37366.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
sw_11_scaffold_2029_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3855..4100)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XYU1_NATM8
hypothetical protein
FMN-binding domain protein {ECO:0000313|EMBL:CCQ35303.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensi
sw_11_scaffold_2029_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4384..7080)
DNA (2697bp) protein (899aa)
peptidase S8 and S53 subtilisin kexin sedolisin id=24614702 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ESP88850.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" sourc
peptidase S8 and S53 subtilisin kexin sedolisin
sw_11_scaffold_2029_7
unknown

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comp(7155..7514)
DNA (360bp) protein (120aa)

This feature has no annotations

sw_11_scaffold_2029_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8223..10916
DNA (2694bp) protein (898aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7R034_9EURY
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:EFW89928.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Ha
peptidase S8 and S53 subtilisin kexin sedolisin
sw_11_scaffold_2029_9
unknown

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11129..11254
DNA (126bp) protein (42aa)

This feature has no annotations

sw_11_scaffold_2029_10
unknown

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comp(12136..12246)
DNA (111bp) protein (37aa)

This feature has no annotations

sw_11_scaffold_2029_11
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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13171..15042
DNA (1872bp) protein (624aa)
CARDB domain-containing protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NUE7_HALBP
APHP domain-containing protein {ECO:0000313|EMBL:EMA63074.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum D
CARDB domain-containing protein
sw_11_scaffold_2029_12
unknown

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comp(15313..15441)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_11_scaffold_2029_trna_1
unknown

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comp(15627..15699)
DNA (73bp)
transferRNA
sw_11_scaffold_2029_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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16002..16238
DNA (237bp) protein (79aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025, ECO:0000313|EMBL:EJN59447.1}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1210908 species="Archaea; Euryarchaeota; Halo
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H n=1 Tax=Halogranum salarium B-1 RepID=J3EWV0_9EURY
sw_11_scaffold_2029_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16235..16426
DNA (192bp) protein (64aa)
rpoB2; DNA-directed RNA polymerase subunit beta'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:CAI48146.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48146.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit B n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN4_NATPD
sw_11_scaffold_2029_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16423..17433
DNA (1011bp) protein (337aa)
rpoB2; DNA-directed RNA polymerase subunit B'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:CCQ37957.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CCQ37957.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit B n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTU2_NATM8
Displaying 16 items

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