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sw_11_scaffold_205

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_205_1
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..1147
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LX97_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM59088.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_11_scaffold_205_2
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2034..2306)
DNA (273bp) protein (91aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LX95_HALLT
CRISPR-associated protein Cas2
sw_11_scaffold_205_3
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2309..3295)
DNA (987bp) protein (329aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer
CRISPR-associated endonuclease Cas1 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LX94_HALLT
CRISPR-associated protein Cas1
sw_11_scaffold_205_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3310..3903)
DNA (594bp) protein (198aa)
CRISPR-associated protein Cas4 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NIS9_9EURY
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:EMA56570.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
CRISPR-associated protein Cas4
sw_11_scaffold_205_5
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3908..6100)
DNA (2193bp) protein (731aa)
Uncharacterized protein {ECO:0000313|EMBL:KKG11219.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
sw_11_scaffold_205_6
unknown

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comp(6097..6828)
DNA (732bp) protein (244aa)

This feature has no annotations

sw_11_scaffold_205_7
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6825..7826)
DNA (1002bp) protein (334aa)
CRISPR-associated protein Csc2 n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AIB3_NATA1
CRISPR-associated protein Csc2 {ECO:0000313|EMBL:ELY97118.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain AT
hypothetical protein
sw_11_scaffold_205_8
unknown

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comp(7849..11169)
DNA (3321bp) protein (1107aa)

This feature has no annotations

sw_11_scaffold_205_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11175..12047)
DNA (873bp) protein (291aa)
CRISPR-associated endoribonuclease Cas6 {ECO:0000313|EMBL:CAI49722.1}; EC=3.1.-.- {ECO:0000313|EMBL:CAI49722.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
CRISPR-associated endoribonuclease Cas6 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ75_NATPD
hypothetical protein
sw_11_scaffold_205_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12182..12844
DNA (663bp) protein (221aa)
CRISPR-associated DNA-binding protein Csm6 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ76_NATPD
hypothetical protein
CRISPR-associated DNA-binding protein Csm6 {ECO:0000313|EMBL:CAI49721.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
sw_11_scaffold_205_11

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comp(13366..14391)
DNA (1026bp) protein (342aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=halophilic archaeon DL31 RepID=G2MFW3_9ARCH
succinylglutamate desuccinylase/aspartoacylase
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:AEN04512.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_11_scaffold_205_12
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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14440..15495
DNA (1056bp) protein (352aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DG76_9EURY
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:ELZ33164.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Hal
htlD; HTR-like protein
sw_11_scaffold_205_13
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15633..16793)
DNA (1161bp) protein (387aa)
Xaa-pro aminopeptidase n=2 Tax=Halobiforma lacisalsi RepID=M0L7S6_9EURY
Xaa-pro aminopeptidase {ECO:0000313|EMBL:EMA29143.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
Xaa-Pro aminopeptidase
sw_11_scaffold_205_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(17304..18107)
DNA (804bp) protein (268aa)
lplA; lipoate-protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] id=24646881 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
lplA; lipoate-protein ligase (EC:6.3.4.-)
Lipoate-protein ligase A {ECO:0000313|EMBL:ERH11044.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_11_scaffold_205_15

Not on your lists

18219..19451
DNA (1233bp) protein (411aa)
Extracellular ligand-binding receptor n=1 Tax=halophilic archaeon DL31 RepID=G2MG98_9ARCH
extracellular ligand-binding receptor rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AEN05992.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_11_scaffold_205_16
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19470..19646
DNA (177bp) protein (59aa)
Inner-membrane translocator n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EKA8_9EURY
Inner-membrane translocator {ECO:0000313|EMBL:ELZ47322.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 102
ABC transporter
Displaying 16 items

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