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sw_11_scaffold_2082

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_2082_1
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2..184)
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA08277.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 3596
sw_11_scaffold_2082_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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277..1575
DNA (1299bp) protein (433aa)
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=931277 s
tRNA pseudouridine synthase Pus10 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MUM0_HALMO
hypothetical protein
sw_11_scaffold_2082_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2023..2652
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSU1_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ65829.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_11_scaffold_2082_4
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2637..3110)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U033_9EURY
Cupin {ECO:0000313|EMBL:EMA64043.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;"
cupin
sw_11_scaffold_2082_5
unknown

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3185..3322
DNA (138bp) protein (46aa)

This feature has no annotations

sw_11_scaffold_2082_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3383..4012
DNA (630bp) protein (210aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=1324957 species="Archaea; Euryarchaeota; H
rnhB; ribonuclease HII (EC:3.1.26.4) id=24615263 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
ribonuclease HII
sw_11_scaffold_2082_7
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3993..4829)
DNA (837bp) protein (279aa)
Protein-export membrane protein SecD n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8Y1_HALJB
secD; preprotein translocase subunit SecD
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalk
sw_11_scaffold_2082_8
unknown

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4834..5265
DNA (432bp) protein (144aa)

This feature has no annotations

sw_11_scaffold_2082_9
unknown

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comp(5789..6013)
DNA (225bp) protein (75aa)

This feature has no annotations

sw_11_scaffold_2082_10
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6046..7584
DNA (1539bp) protein (513aa)
Metal-dependent cyclase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WQ31_9EURY
Metal-dependent cyclase {ECO:0000313|EMBL:ELY50448.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
metal-dependent hydrolase
sw_11_scaffold_2082_11
unknown

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comp(7706..7780)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 11 items

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