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sw_11_scaffold_2088

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_2088_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..2392
DNA (2391bp) protein (797aa)
archaeal DNA polymerase II large subunit (EC:2.7.7.7)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1227457 species="Archaea; Eurya
DNA polymerase II large subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4P3_9EURY
sw_11_scaffold_2088_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2347..2934
DNA (588bp) protein (196aa)
DNA polymerase II, large subunit DP2 (EC:2.7.7.7); K02322 DNA polymerase II large subunit [EC:2.7.7.7] id=24645402 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1085028 species="Archaea; Eurya
DNA polymerase II, large subunit DP2 (EC:2.7.7.7)
sw_11_scaffold_2088_3
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2941..3549)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0L234_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA26045.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_11_scaffold_2088_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3658..4509)
DNA (852bp) protein (284aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] id=24648648 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ERH09782.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
galE1; UDP-glucose 4-epimerase
sw_11_scaffold_2088_5
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4648..6096)
DNA (1449bp) protein (483aa)
Polysaccharide biosynthesis protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DMZ0_9EURY
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ELZ36062.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharo
polysaccharide biosynthesis protein
sw_11_scaffold_2088_6
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6342..7565
DNA (1224bp) protein (408aa)
Sulfatase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DAN9_HALXS
sulfatase
Sulfatase {ECO:0000313|EMBL:AEH36981.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323 / JCM 140
sw_11_scaffold_2088_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7780..8253
DNA (474bp) protein (158aa)
Nicotinamide-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00243}; EC=2.7.7.1 {ECO:0000256|HAMAP-Rule:MF_00243};; NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00243}; NAD(+) pyrophosp
nicotinamide-nucleotide adenylyltransferase id=24647879 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
nicotinamide-nucleotide adenylyltransferase
sw_11_scaffold_2088_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8486..9400
DNA (915bp) protein (305aa)
Malate dehydrogenase (NAD) {ECO:0000313|EMBL:ERH09391.1}; EC=1.1.1.37 {ECO:0000313|EMBL:ERH09391.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic
malate/lactate dehydrogenase (EC:1.1.1.37)
malate/lactate dehydrogenase id=24645170 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
sw_11_scaffold_2088_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10024..10338
DNA (315bp) protein (105aa)
replication factor C small subunit 2 id=24648255 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Replication factor C small subunit {ECO:0000313|EMBL:ERH09390.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
replication factor C small subunit 2
sw_11_scaffold_2088_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10506..11183
DNA (678bp) protein (226aa)
prephenate dehydrogenase (EC:1.3.1.12) id=24646523 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Prephenate dehydrogenase {ECO:0000313|EMBL:ERH10699.1}; EC=1.3.1.12 {ECO:0000313|EMBL:ERH10699.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic a
tyrA; prephenate dehydrogenase (EC:1.3.1.12)
sw_11_scaffold_2088_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11180..12685
DNA (1506bp) protein (502aa)
Methyltransferase type 12 id=24649606 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division {ECO:0000313|EMBL:ERH10695.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
Methyltransferase type 12
sw_11_scaffold_2088_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12780..13271
DNA (492bp) protein (164aa)
PUA domain-containing protein; K07575 PUA domain protein id=24646519 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
RNA-binding protein, containing PUA domain protein {ECO:0000313|EMBL:ERH10694.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
PUA domain-containing protein
sw_11_scaffold_2088_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13323..14633)
DNA (1311bp) protein (437aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP
Glycerol kinase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYT3_HALMD
glycerol kinase
Displaying 13 items

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