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sw_11_scaffold_266

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_266_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(97..375)
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LK83_9EURY
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410, ECO:0000313|EMBL:EMA34007.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" sourc
ribosomal protein L31E
sw_11_scaffold_266_2
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(372..524)
DNA (153bp) protein (51aa)
50S ribosomal protein L39e n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YTS3_9EURY
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1
50S ribosomal protein L39e
sw_11_scaffold_266_3
unknown

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631..930
DNA (300bp) protein (100aa)

This feature has no annotations

sw_11_scaffold_266_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(927..1757)
DNA (831bp) protein (277aa)
Metal transporter family GufA protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4M3_9EURY
Metal transporter family GufA protein {ECO:0000313|EMBL:ELZ29632.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
transporter
sw_11_scaffold_266_5
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2025..2579)
DNA (555bp) protein (185aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227495 species="A
2'-5' RNA ligase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z0K1_9EURY
2'-5' RNA ligase
sw_11_scaffold_266_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2674..5298
DNA (2625bp) protein (875aa)
multi-sensor signal transduction histidine kinase id=24648502 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
PAS sensor histidine kinase {ECO:0000313|EMBL:ERH09634.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
PAS domain S-box
sw_11_scaffold_266_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5323..6810)
DNA (1488bp) protein (496aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=485914 species="Archaea; Eur
cysteinyl-tRNA synthetase n=1 Tax=Halomicrobium katesii RepID=UPI000374755D
sw_11_scaffold_266_8

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comp(7001..7426)
DNA (426bp) protein (142aa)
DNA-binding protein, Tfx family n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZS41_9ARCH
DNA-binding protein, Tfx family {ECO:0000313|EMBL:ESS05560.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
tfx; putative transcriptional regulator
sw_11_scaffold_266_9
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7486..8421
DNA (936bp) protein (312aa)
ABC-type molybdate transport system, periplasmic component n=1 Tax=Natronococcus occultus SP4 RepID=L0JZ71_9EURY
Sulfate/thiosulfate/molybdate ABC transporter substrate-binding protein {ECO:0000313|EMBL:AKH96779.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
ABC-type molybdate transport system, periplasmic component
sw_11_scaffold_266_10
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8418..9245
DNA (828bp) protein (276aa)
ABC-type transport system permease protein (Probable substrate sulfate/thiosulfate/molybdate) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP95_NATPD
ABC transporter permease {ECO:0000313|EMBL:AKH96778.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum s
abc13p; sulfate ABC transporter permease
sw_11_scaffold_266_11
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9242..10402
DNA (1161bp) protein (387aa)
ABC transporter related n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NVB9_HALUD
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AKH96777.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaer
ABC transporter
sw_11_scaffold_266_12
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10399..10719
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0ARB3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY99923.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
hypothetical protein
sw_11_scaffold_266_13
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10779..11114
DNA (336bp) protein (112aa)
cbiX2; cobalamin (vitamin B12) biosynthesis CbiX protein (EC:4.99.1.3)
Uncharacterized protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0BDT8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ08985.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
sw_11_scaffold_266_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11092..11235)
DNA (144bp) protein (48aa)
PyrE-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR53_9EURY
PyrE-like protein {ECO:0000256|HAMAP-Rule:MF_01214}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
orotate phosphoribosyltransferase-like protein
sw_11_scaffold_266_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11195..11563)
DNA (369bp) protein (123aa)
PyrE-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY14_9EURY
PyrE-like protein {ECO:0000256|HAMAP-Rule:MF_01214}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus
orotate phosphoribosyltransferase
sw_11_scaffold_266_16
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11637..11861
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LK75_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA33458.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_11_scaffold_266_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11971..13122
DNA (1152bp) protein (384aa)
Acyl-CoA dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6G4_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA39960.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A
acyl-CoA dehydrogenase
sw_11_scaffold_266_18
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13279..14343
DNA (1065bp) protein (355aa)
potD2; spermidine/putrescine ABC transporter spermidine/putrescine binding protein; K11069 spermidine/putrescine transport system substrate-binding protein id=24623188 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:ERG98998.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Ha
potD2; spermidine/putrescine ABC transporter spermidine/putrescine binding protein
sw_11_scaffold_266_19
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14377..15525
DNA (1149bp) protein (383aa)
ABC-type spermidine/putrescine transport system, ATPase component n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1N7K0_9EURY
ABC-type spermidine/putrescine transport system, ATPase component {ECO:0000313|EMBL:ERG98999.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadrat
potA; ABC-type transport system ATP-binding protein (probable substrate spermidine/putrescine)
sw_11_scaffold_266_20
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15522..16451
DNA (930bp) protein (310aa)
potB; ABC-type transport system permease protein (probable substrate spermidine/putrescine) id=24623190 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
ABC-type spermidine/putrescine transport system, permease component I {ECO:0000313|EMBL:ERG99000.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
potB2; ABC-type transport system permease protein (probable substrate spermidine/putrescine)
sw_11_scaffold_266_21
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16423..17298
DNA (876bp) protein (292aa)
potC2; spermidine/putrescine ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein id=24655387 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:ERG88866.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic
potC2; spermidine/putrescine ABC transporter permease
sw_11_scaffold_266_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17438..17560)
DNA (123bp) protein (41aa)
DICT domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP37_NATPD
hypothetical protein
DICT domain protein {ECO:0000313|EMBL:CAI50115.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
Displaying 22 items

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