ggKbase home page

sw_11_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 66 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_27_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(111..260)
DNA (150bp) protein (50aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNI0_NATM8
small CPxCG-related zinc finger protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCQ35487.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_11_scaffold_27_2

Not on your lists

comp(395..931)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MP38_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07932.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_11_scaffold_27_3
unknown

Not on your lists

1121..1366
DNA (246bp) protein (82aa)

This feature has no annotations

sw_11_scaffold_27_4
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1481..1855)
DNA (375bp) protein (125aa)
Uncharacterized protein id=24625789 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Uncharacterized protein {ECO:0000313|EMBL:ERG97857.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50.;
sw_11_scaffold_27_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2586..2783
DNA (198bp) protein (66aa)
rpoM3; DNA-directed RNA polymerase subunit M3 (EC:2.7.7.6); K03057 transcription elongation factor id=24645314 bin=halophilic_archaeon_J07HX64 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacac
tfs3; transcription elongation factor TFS
sw_11_scaffold_27_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2928..3275)
DNA (348bp) protein (116aa)
rpoM_2; DNA-directed RNA polymerase subunit M 2 (EC:2.7.7.6)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
DNA-directed RNA polymerase subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMU6_NATPD
sw_11_scaffold_27_7
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3320..3877)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VZW0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN02790.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_11_scaffold_27_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3874..4659)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZD07_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJN58560.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_11_scaffold_27_9
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4739..5575)
DNA (837bp) protein (279aa)
RecA-superfamily ATPase possibly involved in signal transduction n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7B3_9EURY
RecA-superfamily ATPase possibly involved in signal transduction
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:AGN02792.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.
sw_11_scaffold_27_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5624..6196)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92227.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_11_scaffold_27_11

Not on your lists

6352..7899
DNA (1548bp) protein (516aa)
ABC-type transporter, periplasmic subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MFU5_9ARCH
ABC transporter periplasmic protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEN04494.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_11_scaffold_27_12
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7907..8815
DNA (909bp) protein (303aa)
ABC transporter; K02033 peptide/nickel transport system permease protein id=24652801 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ERH13331.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halop
ABC transporter
sw_11_scaffold_27_13
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8985..10004
DNA (1020bp) protein (340aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P588_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA65322.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;"
ABC transporter
sw_11_scaffold_27_14
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10004..11296
DNA (1293bp) protein (431aa)
Putative dipeptides/oligopeptides ABC transporter ATP-binding protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ES59_9EURY
Putative dipeptides/oligopeptides ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ50626.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorub
dppD; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein I
sw_11_scaffold_27_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11289..12575
DNA (1287bp) protein (429aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQV3_9EURY
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:EFW93367.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" sou
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein II
sw_11_scaffold_27_16
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12599..13621)
DNA (1023bp) protein (341aa)
GHMP family kinase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R7W3_HALMT
GHMP family kinase
GHMP family kinase {ECO:0000313|EMBL:AFK20323.1}; GHMP kinase {ECO:0000313|EMBL:AHZ23692.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" sou
sw_11_scaffold_27_17
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14162..14452
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NU82_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10979.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_11_scaffold_27_18
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14500..14697
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NF87_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG95735.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_11_scaffold_27_19
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14727..15089
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NK40_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG97328.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
twitching motility protein PilT
sw_11_scaffold_27_20
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15227..15721
DNA (495bp) protein (165aa)
Integrase-like protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PJ87_9EURY
Integrase-like protein {ECO:0000313|EMBL:EMA68820.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.
integrase-like protein
sw_11_scaffold_27_trna_2
unknown

Not on your lists

comp(15756..15826)
DNA (71bp)
transferRNA
sw_11_scaffold_27_21
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16298..16963)
DNA (666bp) protein (222aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C491_9EURY
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" s
phosphate transport system regulatory protein PhoU
sw_11_scaffold_27_22
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16963..17877)
DNA (915bp) protein (305aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate ABC transporter ATP-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQ91_HALVA
phosphate ABC transporter ATP-binding protein
sw_11_scaffold_27_23
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17877..19508)
DNA (1632bp) protein (544aa)
Phosphate ABC transporter permease n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQN7_HALVA
Phosphate ABC transporter permease {ECO:0000313|EMBL:EMA11306.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallis
pstA; phosphate transport system permease protein PstA (TC 3.A.1.7.1)
sw_11_scaffold_27_24
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19508..20455)
DNA (948bp) protein (316aa)
Phosphate ABC transporter, permease protein PstC n=1 Tax=Halorubrum sp. J07HR59 RepID=U1QF89_9EURY
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:ERH03997.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Haloru
phosphate ABC transporter inner membrane subunit PstC
sw_11_scaffold_27_25
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20552..21562)
DNA (1011bp) protein (337aa)
Phosphate ABC transporter substrate-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JTK4_HALVA
Phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:EMA11304.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="
pstS2; phosphate ABC transporter substrate-binding protein
sw_11_scaffold_27_26
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21891..22892
DNA (1002bp) protein (334aa)
Phosphate uptake regulator, PhoU n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D642_HALXS
phosphate uptake regulator PhoU
Phosphate uptake regulator, PhoU {ECO:0000313|EMBL:AEH38902.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (str
sw_11_scaffold_27_27
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22889..23257)
DNA (369bp) protein (123aa)
30S ribosomal protein S8e n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W904_9EURY
30S ribosomal protein S8e
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" s
sw_11_scaffold_27_28
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23554..23955
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P490_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47912.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_11_scaffold_27_29
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23997..24575
DNA (579bp) protein (193aa)
HGPRTase-like protein {ECO:0000256|HAMAP-Rule:MF_01467}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_01467};; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobi
HGPRTase-like protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M5M5_9EURY
phosphoribosyltransferase
Displaying items 1-30 of 66 in total

View Taxonomy