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sw_11_scaffold_286

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_286_1

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3..395
DNA (393bp) protein (131aa)
Transposase, IS605 OrfB family, central region n=1 Tax=uncultured archaeon A07HR60 RepID=V4YIU1_9ARCH
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:ESS11282.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
IS1341-type transposase
sw_11_scaffold_286_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(464..901)
DNA (438bp) protein (146aa)
DUF151 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITX5_NATPD
hypothetical protein
DUF151 family protein {ECO:0000313|EMBL:CAI48408.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_11_scaffold_286_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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961..1245
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Natronomonas pharaonis RepID=Q3ITX4_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48409.3}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_286_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1505..1780)
DNA (276bp) protein (92aa)
PAS sensor histidine kinase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QVY9_9EURY
PAS sensor histidine kinase {ECO:0000313|EMBL:ERH10032.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_11_scaffold_286_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1777..3657)
DNA (1881bp) protein (627aa)
PAS sensor histidine kinase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QVY9_9EURY
PAS sensor histidine kinase {ECO:0000313|EMBL:ERH10032.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
signal-transducing histidine kinase
sw_11_scaffold_286_trna_1
unknown

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comp(3732..3816)
DNA (85bp)
transferRNA
sw_11_scaffold_286_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3921..4796)
DNA (876bp) protein (292aa)
Halorhodopsin n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK96_NATM8
hop; halorhodopsin rbh
Halorhodopsin {ECO:0000313|EMBL:CCQ35499.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strain DSM
sw_11_scaffold_286_7
unknown

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5012..5581
DNA (570bp) protein (190aa)

This feature has no annotations

sw_11_scaffold_286_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5634..6059)
DNA (426bp) protein (142aa)
Blp-like protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNJ2_NATM8
blp; Blp-like protein
Blp-like protein {ECO:0000313|EMBL:CCQ35500.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strain
sw_11_scaffold_286_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6110..7186)
DNA (1077bp) protein (359aa)
Beta-carotene 15,15'-dioxygenase Blh {ECO:0000313|EMBL:CAI48416.1}; EC=1.13.11.63 {ECO:0000313|EMBL:CAI48416.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
Beta-carotene 15,15'-dioxygenase Blh n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITW7_NATPD
brp_2; brp-like protein 2 rbh
sw_11_scaffold_286_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7183..8028)
DNA (846bp) protein (282aa)
crtY; lycopene cyclase (EC:1.14.-.-) rbh
Lycopene beta-cyclase {ECO:0000313|EMBL:CAI48417.1}; EC=5.5.1.19 {ECO:0000313|EMBL:CAI48417.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronom
Lycopene beta-cyclase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITW6_NATPD
sw_11_scaffold_286_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8149..10173)
DNA (2025bp) protein (675aa)
Receiver/sensor/bat box HTH-10 family transcription regulator Bat (Homolog to bacterioopsin activator) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNJ3_NATM8
bat; receiver/sensor/bat box HTH-10 family transcription regulator Bat (homolog to bacterioopsin activator) rbh
Receiver/sensor/bat box HTH-10 family transcription regulator Bat (Homolog to bacterioopsin activator) {ECO:0000313|EMBL:CCQ35503.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Haloba
sw_11_scaffold_286_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10787..12205)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSS8_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37448.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_11_scaffold_286_13
unknown

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comp(12153..12380)
DNA (228bp) protein (76aa)

This feature has no annotations

sw_11_scaffold_286_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12377..14878)
DNA (2502bp) protein (834aa)
hypothetical protein id=24646045 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH11256.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
CHRD domain containing protein
sw_11_scaffold_286_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14850..15506)
DNA (657bp) protein (219aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QP66_9EURY
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase {ECO:0000313|EMBL:ERH08873.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX
peptidase S8/S53 subtilisin kexin sedolisin
sw_11_scaffold_286_16
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15589..17490)
DNA (1902bp) protein (634aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS19547.1}; Flags: Fragment;; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoefl
sw_11_scaffold_286_17
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(17450..18943)
DNA (1494bp) protein (498aa)
Uncharacterized protein (Fragment) n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QBC2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EGQ39590.1}; Flags: Fragment;; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strai
sw_11_scaffold_286_18
unknown

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comp(18924..21032)
DNA (2109bp) protein (703aa)

This feature has no annotations

sw_11_scaffold_286_19
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(22876..24537)
DNA (1662bp) protein (554aa)
Muc19 n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PB51_9EURY
Muc19 {ECO:0000313|EMBL:EMA66030.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
PKD domain protein
sw_11_scaffold_286_20
unknown

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25053..25286
DNA (234bp) protein (78aa)

This feature has no annotations

sw_11_scaffold_286_21
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(25498..29943)
DNA (4446bp) protein (1482aa)
Peptidase S8/S53 subtilisin kexin sedolisin n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9VZS2_9EURY
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ELY42710.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorub
subtilisin-like serine protease
sw_11_scaffold_286_22
unknown

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30294..30698
DNA (405bp) protein (135aa)

This feature has no annotations

sw_11_scaffold_286_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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31029..31865
DNA (837bp) protein (279aa)
Probable cell surface glycoprotein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPD1_NATM8
probable cell surface glycoprotein
Probable cell surface glycoprotein {ECO:0000313|EMBL:CCQ35840.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas mo
Displaying 24 items

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