ggKbase home page

sw_11_scaffold_318

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_318_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..934
DNA (933bp) protein (311aa)
ABC-type ribose transport system, permease n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J7K9_HALJB
ABC-type ribose transport system, permease
ABC-type ribose transport system, permease {ECO:0000313|EMBL:ELY38125.1}; ABC-type ribose transport system, permease protein {ECO:0000313|EMBL:ADJ16029.1}; TaxID=795797 species="Archaea; Euryarchaeota
sw_11_scaffold_318_2
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1089..1361
DNA (273bp) protein (91aa)
Methyltransferase type 11 n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BEQ3_9EURY
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGB30763.1}; Methyltransferase type 11 {ECO:0000313|EMBL:ELY80851.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobact
sw_11_scaffold_318_3
unknown

Not on your lists

1374..1766
DNA (393bp) protein (131aa)

This feature has no annotations

sw_11_scaffold_318_4
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1911..2714)
DNA (804bp) protein (268aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YLD4_METFJ
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AFJ03727.1}; Flags: Precursor;; TaxID=754477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methy
sw_11_scaffold_318_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2807..3622
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L7A6_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29431.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_11_scaffold_318_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3543..4565)
DNA (1023bp) protein (341aa)
Replication factor C small subunit 2 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CVY3_9EURY
Replication factor C small subunit 2 {ECO:0000313|EMBL:ELZ26813.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex ca
replication factor C small subunit 2
sw_11_scaffold_318_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4712..5392
DNA (681bp) protein (227aa)
PAS domain S-box n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D526_9EURY
PAS domain S-box {ECO:0000313|EMBL:ELZ30540.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
boa; bacterio-opsin activator-like protein
sw_11_scaffold_318_8
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5571..6332)
DNA (762bp) protein (254aa)
UspA domain protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X1B0_9EURY
UspA domain protein {ECO:0000313|EMBL:ELY55534.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolicu
universal stress protein UspA-like protein
sw_11_scaffold_318_9
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6519..6941)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3P7_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF27485.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_11_scaffold_318_10
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7108..9447)
DNA (2340bp) protein (780aa)
DEAD/DEAH box helicase {ECO:0000313|EMBL:CCQ34090.1}; Single-stranded-DNA-specific exonuclease protein {ECO:0000313|EMBL:ERJ06131.1}; EC=3.1.-.- {ECO:0000313|EMBL:ERJ06131.1};; TaxID=1033806 species="
DEAD/DEAH box helicase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKV5_9EURY
DEAD/DEAH box helicase
sw_11_scaffold_318_11
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10176..10430)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YS37_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD51562.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
acetyltransferase
sw_11_scaffold_318_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10679..12076)
DNA (1398bp) protein (466aa)
Pyridine nucleotide-disulfide oxidoreductase dimerization region n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYF6_9EURY
Pyridine nucleotide-disulfide oxidoreductase dimerization region {ECO:0000313|EMBL:EMA49884.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococc
pyridine nucleotide-disulfide oxidoreductase dimerisation region
sw_11_scaffold_318_13
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12141..14876)
DNA (2736bp) protein (912aa)
Patched family protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KJA4_9EURY
Patched family protein {ECO:0000313|EMBL:EMA20259.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 1
RND transporter
sw_11_scaffold_318_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14887..15780)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JI34_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61506.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_11_scaffold_318_15
unknown

Not on your lists

16024..16542
DNA (519bp) protein (173aa)

This feature has no annotations

sw_11_scaffold_318_16
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16939..18399
DNA (1461bp) protein (487aa)
FG-GAP repeat-containing protein, possibly sugar-related n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PM90_9EURY
FG-GAP repeat-containing protein, possibly sugar-related
FG-GAP repeat-containing protein, possibly sugar-related {ECO:0000313|EMBL:CCQ32904.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" s
sw_11_scaffold_318_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18437..18604)
DNA (168bp) protein (56aa)
PQQ repeat protein {ECO:0000313|EMBL:CCQ35740.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
Displaying 17 items

View Taxonomy