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sw_11_scaffold_3184

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_3184_1
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..721)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KDW8_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA19028.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
sw_11_scaffold_3184_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1497..2222
DNA (726bp) protein (242aa)
acetyltransferase id=24648828 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative acetyltransferase {ECO:0000313|EMBL:ERH09960.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
N-acetyltransferase GCN5
sw_11_scaffold_3184_3
unknown

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2367..2522
DNA (156bp) protein (52aa)

This feature has no annotations

sw_11_scaffold_3184_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3540..4514
DNA (975bp) protein (325aa)
LSU ribosomal protein L3P n=1 Tax=halophilic archaeon J07HX64 RepID=U1PKK3_9EURY
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rpl3p; 50S ribosomal protein L3P
sw_11_scaffold_3184_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4518..4832
DNA (315bp) protein (105aa)
50S ribosomal protein L4 n=1 Tax=halophilic archaeon J07HX64 RepID=U1QYC9_9EURY
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
50S ribosomal protein L4
sw_11_scaffold_3184_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4829..5152
DNA (324bp) protein (108aa)
50S ribosomal protein L4 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5I3_9EURY
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandens
50S ribosomal protein L4
sw_11_scaffold_3184_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5149..5403
DNA (255bp) protein (85aa)
50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=24646813 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rplW; 50S ribosomal protein L23
sw_11_scaffold_3184_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5406..6140
DNA (735bp) protein (245aa)
rpl2p; 50S ribosomal protein L2P id=24646814 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J
50S ribosomal protein L2
sw_11_scaffold_3184_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6137..6562
DNA (426bp) protein (142aa)
30S ribosomal protein S19P n=1 Tax=halophilic archaeon J07HX64 RepID=U1P2S6_9EURY
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
30S ribosomal protein S15e (S19p)
sw_11_scaffold_3184_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6562..7026
DNA (465bp) protein (155aa)
rpl22p; 50S ribosomal protein L22P id=24646816 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
50S ribosomal protein L22
sw_11_scaffold_3184_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7019..7822
DNA (804bp) protein (268aa)
Ribosomal protein S3 (Fragment) n=1 Tax=halophilic archaeon J07HX64 RepID=U1QYD3_9EURY
Ribosomal protein S3 {ECO:0000313|EMBL:ERH10982.1}; Flags: Fragment;; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rps3p; 30S ribosomal protein S3
sw_11_scaffold_3184_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7822..8046
DNA (225bp) protein (75aa)
50S ribosomal protein L29P n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DDH0_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374, ECO:0000313|EMBL:ELZ33511.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;
rpl29; 50S ribosomal protein L29
sw_11_scaffold_3184_13
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8043..8333
DNA (291bp) protein (97aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
Ribonuclease P protein component 1 n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K8G1_9EURY
ribonuclease P protein component 1
sw_11_scaffold_3184_14
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8324..8620
DNA (297bp) protein (99aa)
30S ribosomal protein S17P n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LFH1_9EURY
30S ribosomal protein S17P {ECO:0000313|EMBL:EMA32301.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
ribosomal protein S17P
Displaying 14 items

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