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sw_11_scaffold_3250

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_3250_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..428
DNA (426bp) protein (142aa)
peptidase S9 prolyl oligopeptidase active site domain protein id=24645791 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Dipeptidyl acylaminoacyl-peptidase {ECO:0000313|EMBL:ERH10010.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
sw_11_scaffold_3250_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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601..2367
DNA (1767bp) protein (589aa)
Putative efflux protein, MATE family n=1 Tax=halophilic archaeon J07HX64 RepID=U1QTF9_9EURY
Putative efflux protein, MATE family {ECO:0000313|EMBL:ERH09067.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
MATE efflux family protein
sw_11_scaffold_3250_3
unknown

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2617..2808
DNA (192bp) protein (64aa)

This feature has no annotations

sw_11_scaffold_3250_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2805..3041)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PFA3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH09066.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_11_scaffold_3250_5
unknown

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3200..3715
DNA (516bp) protein (172aa)

This feature has no annotations

sw_11_scaffold_3250_6
unknown

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comp(3779..4117)
DNA (339bp) protein (113aa)

This feature has no annotations

sw_11_scaffold_3250_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4123..5592
DNA (1470bp) protein (490aa)
cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) (EC:3.2.1.14)
hypothetical protein id=24646269 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10449.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_11_scaffold_3250_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5600..6325)
DNA (726bp) protein (242aa)
hypothetical protein id=24645785 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10004.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_11_scaffold_3250_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6693..7571)
DNA (879bp) protein (293aa)
Ribonuclease BN n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJS5_HALVA
Ribonuclease BN {ECO:0000313|EMBL:EMA09387.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;
ribonuclease BN
sw_11_scaffold_3250_10
unknown

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comp(8132..8656)
DNA (525bp) protein (175aa)

This feature has no annotations

sw_11_scaffold_3250_11
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8924..9967)
DNA (1044bp) protein (348aa)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000256|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000256|HAMAP-Rule:
N2,N2-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32)
N2,N2-dimethylguanosine tRNA methyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI00037AD6BA
sw_11_scaffold_3250_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10015..10542)
DNA (528bp) protein (176aa)
hypothetical protein id=24649058 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10191.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_11_scaffold_3250_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10573..12357)
DNA (1785bp) protein (595aa)
hypothetical protein id=24649059 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Conserved repeat domain protein {ECO:0000313|EMBL:ERH10192.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_11_scaffold_3250_14
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12354..12815)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CYY8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27094.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
Displaying 14 items

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