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sw_11_scaffold_3294

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_3294_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..143)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPR0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46719.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_11_scaffold_3294_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(183..767)
DNA (585bp) protein (195aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
truD; tRNA pseudouridine synthase D (EC:5.4.99.-)
Probable tRNA pseudouridine synthase D n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBS6_9EURY
sw_11_scaffold_3294_3
unknown

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953..1633
DNA (681bp) protein (227aa)

This feature has no annotations

sw_11_scaffold_3294_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1694..2506
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQB0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93174.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_11_scaffold_3294_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2525..2761)
DNA (237bp) protein (79aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00628}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00628};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00628};; TaxID=1132509 species="Archaea; Euryarchaeota;
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSL0_9EURY
sw_11_scaffold_3294_6

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comp(3074..4198)
DNA (1125bp) protein (375aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
Glycerol-3-phosphate-transporting ATPase {ECO:0000313|EMBL:AEN05509.1}; EC=3.6.3.20 {ECO:0000313|EMBL:AEN05509.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Glycerol-3-phosphate-transporting ATPase n=1 Tax=halophilic archaeon DL31 RepID=G2MK87_9ARCH
sw_11_scaffold_3294_7

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comp(4277..4945)
DNA (669bp) protein (223aa)
ABC-type transporter, integral membrane subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MK88_9ARCH
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEN05510.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_11_scaffold_3294_8
unknown

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5243..5599
DNA (357bp) protein (119aa)

This feature has no annotations

sw_11_scaffold_3294_9

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comp(5992..7656)
DNA (1665bp) protein (555aa)
Extracellular solute-binding protein family 1 n=1 Tax=halophilic archaeon DL31 RepID=G2ML35_9ARCH
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:AEN05512.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_11_scaffold_3294_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7957..8805)
DNA (849bp) protein (283aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAM5_9EURY
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:EMA42842.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
putative metallo-beta-lactamase family hydrolase
sw_11_scaffold_3294_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8887..9462
DNA (576bp) protein (192aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCI4_9EURY
Displaying 11 items

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