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sw_11_scaffold_3414

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_3414_1
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..463
DNA (462bp) protein (154aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000313|EMBL:ELY64532.1}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000313|EMBL:E
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XSP1_9EURY
sw_11_scaffold_3414_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(474..830)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMV4_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50552.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_3414_3
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1025..1255
DNA (231bp) protein (77aa)
Putative transposase (Fragment) n=1 Tax=Halorubrum sp. J07HR59 RepID=U1P3D0_9EURY
IS1341-type transposase {ECO:0000313|EMBL:AKH98340.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
transposase (IS891/IS1136/IS1341/IS605)
sw_11_scaffold_3414_4
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1314..2429
DNA (1116bp) protein (372aa)
IS1341-type transposase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CI29_9EURY
IS1341-type transposase {ECO:0000313|EMBL:ELZ21519.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
IS1341-type transposase
sw_11_scaffold_3414_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2758..3468
DNA (711bp) protein (237aa)
flavodoxin reductase family protein id=24644424 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
FAD/NAD binding oxidoreductase {ECO:0000313|EMBL:ERH08646.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_11_scaffold_3414_6
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3488..4018
DNA (531bp) protein (177aa)
hypothetical protein id=24624485 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Uncharacterized protein {ECO:0000313|EMBL:ERG99879.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50.;
hypothetical protein
sw_11_scaffold_3414_trna_1
unknown

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comp(4201..4271)
DNA (71bp)
transferRNA
sw_11_scaffold_3414_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4327..4704)
DNA (378bp) protein (126aa)
cbf5; tRNA/rRNA pseudouridine synthase Cbf5 (EC:5.4.99.12)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSY9_NATM8
sw_11_scaffold_3414_8
unknown

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4916..5086
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying 9 items

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