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sw_11_scaffold_35

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_35_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..159)
DNA (159bp) protein (53aa)
Transposase, IS605 OrfB family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N356_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:EMA52311.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus t
transposase (IS891/IS1136/IS1341/IS605)
sw_11_scaffold_35_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(245..640)
DNA (396bp) protein (132aa)
Transposase IS200-family protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HGC6_9EURY
Transposase {ECO:0000313|EMBL:ERG92790.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW1.;"
transposase IS200-family protein
sw_11_scaffold_35_3
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1117..1719
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8C1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00514.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_11_scaffold_35_4
Piriformospora indica, Piriformospora, Sebacinales, Agaricomycetes, Basidiomycota, Fungi

Not on your lists

1740..2153
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:CCA66957.1}; TaxID=1109443 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Sebacinales; Sebacinales group B; Piriformospor
sw_11_scaffold_35_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2164..3000)
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HV94_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM56323.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_11_scaffold_35_6
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3708..4961)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JXP6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB36874.1}; Flags: Precursor;; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcu
sw_11_scaffold_35_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5100..6092)
DNA (993bp) protein (331aa)
Oxidoreductase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DCU0_9EURY
Oxidoreductase {ECO:0000313|EMBL:ELZ32623.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.
oxidoreductase
sw_11_scaffold_35_8
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6387..7286
DNA (900bp) protein (300aa)
DNA adenine methylase (EC:2.1.1.72)
DNA adenine methylase n=1 Tax=Halorubrum sp. T3 RepID=UPI000379E1BC
DNA adenine methylase {ECO:0000313|EMBL:ELZ42977.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 192
sw_11_scaffold_35_9
unknown

Not on your lists

comp(7397..7627)
DNA (231bp) protein (77aa)

This feature has no annotations

sw_11_scaffold_35_10
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7706..7882)
DNA (177bp) protein (59aa)
ADP-ribose pyrophosphatase (Fragment) n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EJZ5_9EURY
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:ELZ47212.1}; Flags: Fragment;; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
sw_11_scaffold_35_11
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8112..9113)
DNA (1002bp) protein (334aa)
succinyl-diaminopimelate desuccinylase; K01438 acetylornithine deacetylase [EC:3.5.1.16] id=24623218 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Peptidase M20 family protein {ECO:0000313|EMBL:ERG99018.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQ
succinyl-diaminopimelate desuccinylase
sw_11_scaffold_35_12
unknown

Not on your lists

comp(9286..12228)
DNA (2943bp) protein (981aa)

This feature has no annotations

sw_11_scaffold_35_13
unknown

Not on your lists

comp(12225..13643)
DNA (1419bp) protein (473aa)

This feature has no annotations

sw_11_scaffold_35_14
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13909..14595
DNA (687bp) protein (229aa)
Integrase family protein n=1 Tax=Halobacterium sp. DL1 RepID=G4ICY9_9EURY
Integrase {ECO:0000313|EMBL:AHG05030.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
integrase family protein
sw_11_scaffold_35_15
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14793..15536)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4ICQ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05031.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
conserved hypothetical protein (DUF45)
sw_11_scaffold_35_16
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15533..18493)
DNA (2961bp) protein (987aa)
type I restriction-modification system, restriction subunit R (EC:3.1.21.3)
Type I restriction-modification system restriction endonuclease cleavage subunit HsdR protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PMT2_9EURY
Type I restriction-modification system restriction endonuclease cleavage subunit HsdR protein {ECO:0000313|EMBL:ERJ07639.1}; Type I restriction-modification system, restriction subunit R {ECO:0000313|
sw_11_scaffold_35_17
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18541..19806)
DNA (1266bp) protein (422aa)
Filamentation induced by cAMP protein fic n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KW98_9EURY
Filamentation induced by cAMP protein fic {ECO:0000313|EMBL:EMA23995.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
filamentation induced by cAMP protein fic
sw_11_scaffold_35_18
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19981..21351)
DNA (1371bp) protein (457aa)
Type I site-specific deoxyribonuclease subunit RmeS {ECO:0000313|EMBL:CCC40456.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CCC40456.1};; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales
Specificity determinant for hsdM and hsdR n=3 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AAD7_9EURY
restriction modification system DNA specificity subunit
sw_11_scaffold_35_19
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21348..22910)
DNA (1563bp) protein (521aa)
type I restriction-modification system, DNA-methyltransferase subunit M (EC:2.1.1.72)
Type I restriction modification enzyme M subunit protein {ECO:0000313|EMBL:ERJ07642.1}; Type I restriction-modification system, DNA-methyltransferase subunit M {ECO:0000313|EMBL:CCQ32701.1}; EC=2.1.1.
Type I restriction modification enzyme M subunit protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PMT5_9EURY
sw_11_scaffold_35_trna_1
unknown

Not on your lists

comp(23108..23180)
DNA (73bp)
transferRNA
sw_11_scaffold_35_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23540..24079)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSV2_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37442.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_11_scaffold_35_21
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24121..24489)
DNA (369bp) protein (123aa)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMG0_HALUD
Protein-tyrosine phosphatase, low molecular weight
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:ACV12599.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="
sw_11_scaffold_35_22
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24621..24833)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M750_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01758.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
Displaying 23 items

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