ggKbase home page

sw_11_scaffold_398

Search features with annotation key words

Displaying 29 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_398_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..221)
DNA (219bp) protein (73aa)
NMT1/THI5 like domain-containing protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L8W7_HALJP
NMT1/THI5 like domain-containing protein {ECO:0000313|EMBL:EMA28390.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
sw_11_scaffold_398_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1467..2234)
DNA (768bp) protein (256aa)
ArcR family transcription regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CVV0_9EURY
ArcR family transcription regulator {ECO:0000313|EMBL:ELZ27350.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
arcR21; ArcR family transcription regulator
sw_11_scaffold_398_3
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2358..3464)
DNA (1107bp) protein (369aa)
NADH-dependent dehydrogenase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HNZ3_9EURY
NADH-dependent dehydrogenase {ECO:0000313|EMBL:ELZ85422.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33
NADH-dependent dehydrogenase
sw_11_scaffold_398_4
unknown

Not on your lists

3571..3789
DNA (219bp) protein (73aa)

This feature has no annotations

sw_11_scaffold_398_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4267..5712
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L4B0_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28386.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_11_scaffold_398_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6036..7184
DNA (1149bp) protein (383aa)
Oxidoreductase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L480_HALJP
Oxidoreductase {ECO:0000313|EMBL:EMA28387.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
oxidoreductase
sw_11_scaffold_398_7
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7227..8273)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0C9F1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDE58814.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
sw_11_scaffold_398_8
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8959..9801
DNA (843bp) protein (281aa)
5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDA9_9EURY
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:KDE58813.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagn
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
sw_11_scaffold_398_9
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9953..10378)
DNA (426bp) protein (142aa)
Isovaleryl-CoA dehydrogenase (EC:1.3.99.10)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P526_9EURY
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EMA65252.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Haloru
sw_11_scaffold_398_10
unknown

Not on your lists

comp(11641..11895)
DNA (255bp) protein (85aa)

This feature has no annotations

sw_11_scaffold_398_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12983..13246
DNA (264bp) protein (88aa)
IS1341-type transposase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRT6_NATPD
IS1341-type transposase
IS1341-type transposase ISNph25 {ECO:0000313|EMBL:CAI49156.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
sw_11_scaffold_398_12
unknown

Not on your lists

13351..13512
DNA (162bp) protein (54aa)

This feature has no annotations

sw_11_scaffold_398_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13542..15491)
DNA (1950bp) protein (650aa)
Chromosome segregation protein (Spc25, Csm1, Pcs1) n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYR7_9EURY
Chromosome segregation protein (Spc25, Csm1, Pcs1) {ECO:0000313|EMBL:ELZ27009.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="
Chromosome segregation protein (Spc25, Csm1, Pcs1)
sw_11_scaffold_398_14
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15566..16186)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NWG2_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ69382.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_11_scaffold_398_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16755..18326)
DNA (1572bp) protein (524aa)
Choline-sulfatase n=2 Tax=Halococcus hamelinensis RepID=M0LUE0_9EURY
Choline-sulfatase {ECO:0000313|EMBL:EMA37187.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
hypothetical protein
sw_11_scaffold_398_16
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18517..19491
DNA (975bp) protein (325aa)
Fumarylacetoacetate hydrolase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B4W8_NATA1
fumarylacetoacetate hydrolase
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:ELZ04694.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATC
sw_11_scaffold_398_17
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19537..20739)
DNA (1203bp) protein (401aa)
Alcohol dehydrogenase, class IV n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L0E1_HALJP
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:EMA26996.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica
alcohol dehydrogenase
sw_11_scaffold_398_18
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21307..22131)
DNA (825bp) protein (275aa)
IclR family transcriptional regulator n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VPQ3_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELY38962.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum ti
hypothetical protein
sw_11_scaffold_398_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22503..23486
DNA (984bp) protein (328aa)
ABC transporter substrate-binding protein
gloA; Lactoylglutathione lyase; K15975 glyoxalase family protein id=24658817 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ABC44718.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source=
sw_11_scaffold_398_20
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23614..24630
DNA (1017bp) protein (339aa)
Extra-cytoplasmic solute receptor n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0AEE3_9EURY
Extra-cytoplasmic solute receptor {ECO:0000313|EMBL:ELY96247.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DS
hypothetical protein
sw_11_scaffold_398_21
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24661..25203
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Halarchaeum acidiphilum RepID=UPI00037354AC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01269.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_11_scaffold_398_22
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25203..26702
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0ST74_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY97070.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
sw_11_scaffold_398_23
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27491..27643)
DNA (153bp) protein (51aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA26854.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_11_scaffold_398_24
unknown

Not on your lists

27826..28017
DNA (192bp) protein (64aa)

This feature has no annotations

sw_11_scaffold_398_25
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28116..28598)
DNA (483bp) protein (161aa)
Putative O-methyltransferase n=1 Tax=Natronococcus occultus SP4 RepID=L0JWU6_9EURY
putative O-methyltransferase
Putative O-methyltransferase {ECO:0000313|EMBL:AGB37246.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4
sw_11_scaffold_398_26
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28657..28935)
DNA (279bp) protein (93aa)
O-methyltransferase family 3 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J413_HALJB
O-methyltransferase family 3
O-methyltransferase family 3 {ECO:0000313|EMBL:ADJ15405.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus je
sw_11_scaffold_398_27
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29047..29568
DNA (522bp) protein (174aa)
UspA domain-containing protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LXZ3_9EURY
UspA domain-containing protein {ECO:0000313|EMBL:EMA37229.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireduce
UspA domain-containing protein
sw_11_scaffold_398_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29667..31562
DNA (1896bp) protein (632aa)
Hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CC83_9EURY
Hydrolase {ECO:0000313|EMBL:ELZ19957.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
acyl esterase
sw_11_scaffold_398_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31742..32359
DNA (618bp) protein (206aa)
Carbon monoxide dehydrogenase subunit G n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0C9K2_9EURY
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:ELZ19956.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
carbon monoxide dehydrogenase subunit G
Displaying 29 items

View Taxonomy