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sw_11_scaffold_408

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_408_1
unknown

Not on your lists

comp(3..143)
DNA (141bp) protein (47aa)

This feature has no annotations

sw_11_scaffold_408_2
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(716..1564)
DNA (849bp) protein (283aa)
Bacteriorhodopsin n=1 Tax=halophilic archaeon J07HB67 RepID=U1PN30_9EURY
Bacteriorhodopsin {ECO:0000313|EMBL:ERH11544.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
capsular polysaccharide biosynthesis protein CpsH
sw_11_scaffold_408_3
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1716..2177)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DQN6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ37143.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
hypothetical protein
sw_11_scaffold_408_4
unknown

Not on your lists

comp(2248..3132)
DNA (885bp) protein (295aa)

This feature has no annotations

sw_11_scaffold_408_5
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3225..4385
DNA (1161bp) protein (387aa)
ABC-type transport system, substrate-binding protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EI58_9EURY
ABC-type transport system, substrate-binding protein {ECO:0000313|EMBL:ELZ46763.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
yufN; ABC transporter
sw_11_scaffold_408_6
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4339..5268)
DNA (930bp) protein (310aa)
Putative ABC transporter ATP-binding protein YufO n=1 Tax=Streptomyces afghaniensis 772 RepID=S4N248_9ACTO
Putative ABC transporter ATP-binding protein YufO {ECO:0000313|EMBL:EPJ40977.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomy
hypothetical protein
sw_11_scaffold_408_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5294..5812
DNA (519bp) protein (173aa)
Monosaccharide-transporting ATPase (EC:3.6.3.17)
Nucleoside ABC transporter ATP-binding protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HES5_9EURY
Nucleoside ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESP88608.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" so
sw_11_scaffold_408_8
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5904..7403
DNA (1500bp) protein (500aa)
Ribose/branched-chain amino acids ABC transporter permease n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EG74_9EURY
Ribose/branched-chain amino acids ABC transporter permease {ECO:0000313|EMBL:ELZ46765.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sour
ABC-type transport system permease protein (probable substrate sugar)
sw_11_scaffold_408_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7400..8494
DNA (1095bp) protein (365aa)
Ribose ABC transporter permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CS35_9EURY
Ribose ABC transporter permease {ECO:0000313|EMBL:ELZ26065.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pa
ribose ABC transporter permease
sw_11_scaffold_408_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8665..9957
DNA (1293bp) protein (431aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4ID43_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA34981.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_11_scaffold_408_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10075..10488)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CC34_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ19907.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_11_scaffold_408_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10489..11316)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CB90_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ19908.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_11_scaffold_408_13
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11489..11698)
DNA (210bp) protein (70aa)
hypothetical protein id=24655046 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG89945.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_11_scaffold_408_14
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11847..12464
DNA (618bp) protein (206aa)
hypothetical protein id=24655044 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG89944.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_11_scaffold_408_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12448..14304)
DNA (1857bp) protein (619aa)
Carbon starvation protein CstA n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7J6_9EURY
Carbon starvation protein CstA {ECO:0000313|EMBL:EMA53094.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
carbon starvation protein, membrane protein
sw_11_scaffold_408_16
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14418..15257)
DNA (840bp) protein (280aa)
arsA2; arsenical pump-driving ATPase (EC:3.6.3.16)
Arsenical pump-driving ATPase n=3 Tax=Haloferax RepID=M0FBG8_9EURY
Arsenical pump-driving ATPase {ECO:0000313|EMBL:ELZ57361.1}; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-646
sw_11_scaffold_408_17
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15257..15418)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1P8S1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89937.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
Displaying 17 items

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