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sw_11_scaffold_42

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_42_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..642)
DNA (642bp) protein (214aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:ELZ22437.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ22437.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit B n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJ99_9EURY
DNA-directed RNA polymerase subunit beta''
sw_11_scaffold_42_2
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(639..866)
DNA (228bp) protein (76aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
DNA-directed RNA polymerase subunit H n=3 Tax=Natrialba RepID=D3SW57_NATMM
RNA polymerase Rpb5
sw_11_scaffold_42_trna_1
unknown

Not on your lists

1126..1198
DNA (73bp)
transferRNA
sw_11_scaffold_42_3

Not on your lists

1248..2432
DNA (1185bp) protein (395aa)
Site-specific recombinase XerD n=1 Tax=uncultured archaeon A07HR60 RepID=V5A6S2_9ARCH
Site-specific recombinase XerD {ECO:0000313|EMBL:ESS11245.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
XerC/D-like integrase
sw_11_scaffold_42_4
unknown

Not on your lists

2742..3701
DNA (960bp) protein (320aa)

This feature has no annotations

sw_11_scaffold_42_5
unknown

Not on your lists

3849..4130
DNA (282bp) protein (94aa)

This feature has no annotations

sw_11_scaffold_42_6
unknown

Not on your lists

comp(4146..5087)
DNA (942bp) protein (314aa)

This feature has no annotations

sw_11_scaffold_42_7
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5390..5875)
DNA (486bp) protein (162aa)
Putative nucleic acid-binding protein, contains PIN domain protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1PUM8_9EURY
Putative nucleic acid-binding protein, contains PIN domain protein {ECO:0000313|EMBL:ERG96081.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadra
hypothetical protein
sw_11_scaffold_42_8
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5896..6291)
DNA (396bp) protein (132aa)
Transcriptional regulator, CopG family protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NG43_9EURY
Transcriptional regulator, CopG family protein {ECO:0000313|EMBL:ERG96080.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloq
transcriptional regulator, CopG family
sw_11_scaffold_42_9
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6350..6790
DNA (441bp) protein (147aa)
DNA repair protein RadC n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZDE0_9EURY
DNA repair protein RadC {ECO:0000313|EMBL:ELY83607.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
radC2; putative DNA repair protein
sw_11_scaffold_42_10
unknown

Not on your lists

6923..8338
DNA (1416bp) protein (472aa)

This feature has no annotations

sw_11_scaffold_42_11
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8499..8726
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LG47_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC39067.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_11_scaffold_42_12
unknown

Not on your lists

comp(8866..9198)
DNA (333bp) protein (111aa)

This feature has no annotations

sw_11_scaffold_42_13
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9238..9645)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18F68_HALWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY83614.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
sw_11_scaffold_42_14
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9642..11327)
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZAW3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY83615.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
hypothetical protein
sw_11_scaffold_42_15
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11324..12307)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZC82_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY83616.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
hypothetical protein
sw_11_scaffold_42_16
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12304..14880)
DNA (2577bp) protein (859aa)
Transfer complex protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZDE7_9EURY
Transfer complex protein {ECO:0000313|EMBL:ELY83617.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
trsE; transfer complex protein
sw_11_scaffold_42_17
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14883..16133)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18F73_HALWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ53385.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_11_scaffold_42_18
unknown

Not on your lists

comp(16130..16513)
DNA (384bp) protein (128aa)

This feature has no annotations

sw_11_scaffold_42_19
unknown

Not on your lists

16757..17281
DNA (525bp) protein (175aa)

This feature has no annotations

sw_11_scaffold_42_20
unknown

Not on your lists

17318..17785
DNA (468bp) protein (156aa)

This feature has no annotations

sw_11_scaffold_42_21
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17788..19458
DNA (1671bp) protein (557aa)
Peptidase M48 family protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18F77_HALWD
htpX; protease HtpX
Peptidase M48 family protein {ECO:0000313|EMBL:CAJ53381.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (s
sw_11_scaffold_42_22
unknown

Not on your lists

19514..20029
DNA (516bp) protein (172aa)

This feature has no annotations

sw_11_scaffold_42_23
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20217..21143
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0HYE1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ88144.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717
hypothetical protein
sw_11_scaffold_42_24
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21250..21543
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K1W3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA15201.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_11_scaffold_42_25
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21606..22034
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K5V0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA15200.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
Phage integrase family domain-containing protein
sw_11_scaffold_42_26
unknown

Not on your lists

22402..22650
DNA (249bp) protein (83aa)

This feature has no annotations

sw_11_scaffold_42_27
Thermoproteus sp. AZ2, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(22641..23378)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) RepID=Q8ZU45_PYRAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJR73999.1}; TaxID=1609232 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteus sp. AZ2.;"
Displaying 28 items

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