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sw_11_scaffold_420

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_420_1
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(335..1453)
DNA (1119bp) protein (373aa)
ISH8-type transposase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JVX1_9EURY
ISH8-type transposase {ECO:0000313|EMBL:EMA13337.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33
ISH8-type transposase
sw_11_scaffold_420_2
unknown

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comp(1627..1815)
DNA (189bp) protein (63aa)

This feature has no annotations

sw_11_scaffold_420_3

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1873..2544
DNA (672bp) protein (224aa)
Site-specific recombinase XerC (Fragment) n=1 Tax=uncultured archaeon A07HR60 RepID=V4YIR5_9ARCH
Site-specific recombinase XerC {ECO:0000313|EMBL:ESS11247.1}; Flags: Fragment;; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
site-specific recombinase xerd
sw_11_scaffold_420_4
Haloferax sp. ATCC BAA-645, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2646..4127
DNA (1482bp) protein (494aa)
Sulfatase n=3 Tax=Haloferax RepID=M0G814_9EURY
Sulfatase {ECO:0000313|EMBL:ELZ67652.1}; TaxID=1227463 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-645.;"
sulfatase
sw_11_scaffold_420_5
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4124..5251
DNA (1128bp) protein (376aa)
Glycosyl transferase, group 1 n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AGF4_9EURY
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ELY97624.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077
hypothetical protein
sw_11_scaffold_420_6
unknown

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5248..7035
DNA (1788bp) protein (596aa)

This feature has no annotations

sw_11_scaffold_420_7
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7032..8558
DNA (1527bp) protein (509aa)
Polysaccharide biosynthesis protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PLX9_9EURY
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EMA71061.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JC
polysaccharide biosynthesis protein
sw_11_scaffold_420_8
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8863..9858
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I7R4_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB15635.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
sw_11_scaffold_420_9
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

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10130..11011
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI000374BD82
glycosyltransferase Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
glycosyl transferase, family 2
sw_11_scaffold_420_10
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11113..12321
DNA (1209bp) protein (403aa)
LPS glycosyltransferase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V3C0_HALMA
lpg2; LPS glycosyltransferase
LPS glycosyltransferase {ECO:0000313|EMBL:AAV45982.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_11_scaffold_420_11
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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12333..13754
DNA (1422bp) protein (474aa)
Sulfatase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ83_HALMD
sulfatase Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
sulfatase
sw_11_scaffold_420_12
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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13878..14900
DNA (1023bp) protein (341aa)
galE; nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=2 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18EM2_HALWD
GalE family epimerase/dehydratase {ECO:0000313|EMBL:CAJ53601.2}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsb
sw_11_scaffold_420_13
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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14897..15913
DNA (1017bp) protein (339aa)
galE; nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18EM3_HALWD
GalE family epimerase/dehydratase {ECO:0000313|EMBL:CAJ53600.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsb
sw_11_scaffold_420_14
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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15924..17213
DNA (1290bp) protein (430aa)
Glycosyltransferase family protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EIS2_9EURY
Glycosyltransferase family protein {ECO:0000313|EMBL:ELZ46958.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense
rfaG; glycosyltransferase family protein
sw_11_scaffold_420_15
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17197..17733)
DNA (537bp) protein (179aa)
nudF; ADP-ribose pyrophosphatase (EC:3.6.1.13)
NUDIX family hydrolase n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18EM4_HALWD
NUDIX family hydrolase {ECO:0000313|EMBL:CAJ53599.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
Displaying 15 items

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