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sw_11_scaffold_4259

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_4259_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..180)
DNA (180bp) protein (60aa)
ipp1; inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=268739 species="Arc
Inorganic pyrophosphatase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNP8_NATM8
sw_11_scaffold_4259_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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397..753
DNA (357bp) protein (119aa)
Transcription regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHG6_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ22740.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
PadR family transcriptional regulator
sw_11_scaffold_4259_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(780..1223)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKA9_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35564.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_11_scaffold_4259_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1199..1831)
DNA (633bp) protein (211aa)
rnhA2; ribonuclease H, type 1 (EC:3.1.26.4)
Ribonuclease H, type 1 {ECO:0000313|EMBL:CCQ35563.1}; EC=3.1.26.4 {ECO:0000313|EMBL:CCQ35563.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
Ribonuclease H, type 1 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNM9_NATM8
sw_11_scaffold_4259_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2035..2226
DNA (192bp) protein (64aa)
Transcription initiation factor IIB n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGT8_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
transcription initiation factor IIB 2
sw_11_scaffold_4259_6
unknown

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2673..2900
DNA (228bp) protein (76aa)

This feature has no annotations

sw_11_scaffold_4259_7
unknown

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2958..3719
DNA (762bp) protein (254aa)

This feature has no annotations

sw_11_scaffold_4259_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3846..4439
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMH6_NATPD
hypothetical protein
DUF650/DUF651 domain protein {ECO:0000313|EMBL:CAI50682.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_11_scaffold_4259_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4610..4855
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMH6_NATPD
hypothetical protein
DUF650/DUF651 domain protein {ECO:0000313|EMBL:CAI50682.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_11_scaffold_4259_10
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4922..5758)
DNA (837bp) protein (279aa)
proline dehydrogenase (EC:1.5.99.8)
Proline dehydrogenase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JED3_9EURY
Proline dehydrogenase {ECO:0000313|EMBL:EMA06005.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 35960.
sw_11_scaffold_4259_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5933..6319
DNA (387bp) protein (129aa)
UPF0290 protein NP_0990A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Y990_NATPD
cdsA; hypothetical protein
UPF0290 protein NP_0990A {ECO:0000255|HAMAP-Rule:MF_01117}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_11_scaffold_4259_trna_1
unknown

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6487..6560
DNA (74bp)
transferRNA
sw_11_scaffold_4259_12
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7110..7364)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TUT3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39485.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
sw_11_scaffold_4259_13
unknown

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comp(7361..7591)
DNA (231bp) protein (77aa)

This feature has no annotations

sw_11_scaffold_4259_14

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comp(7959..8495)
DNA (537bp) protein (179aa)
Universal stress protein UspA related nucleotide-binding protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YKE9_9ARCH
Universal stress protein UspA related nucleotide-binding protein {ECO:0000313|EMBL:ESS11957.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
UspA domain-containing protein
Displaying 15 items

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