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sw_11_scaffold_448

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_448_trna_1
unknown

Not on your lists

comp(3..76)
DNA (74bp)
transferRNA
sw_11_scaffold_448_1
unknown

Not on your lists

comp(187..420)
DNA (234bp) protein (78aa)

This feature has no annotations

sw_11_scaffold_448_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

461..1213
DNA (753bp) protein (251aa)
hypothetical protein
hypothetical protein id=24659677 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Membrane protein, putative {ECO:0000313|EMBL:ABC46070.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_11_scaffold_448_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1257..1628
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24842.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_448_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1625..2494
DNA (870bp) protein (290aa)
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:ABC46108.1}; EC=2.7.7.41 {ECO:0000313|EMBL:ABC46108.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Phosphatidate cytidylyltransferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1U8_SALRD
cdsA; phosphatidate cytidylyltransferase
sw_11_scaffold_448_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2832..4829
DNA (1998bp) protein (666aa)
mutL; DNA mismatch repair protein mutL; K03572 DNA mismatch repair protein MutL id=24659673 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
mutL; DNA mismatch repair protein mutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
sw_11_scaffold_448_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5032..5970
DNA (939bp) protein (313aa)
Chain length determinant protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6F5_SALRM
Chain length determinant protein
Chain length determinant protein {ECO:0000313|EMBL:CBH23610.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_11_scaffold_448_7
unknown

Not on your lists

comp(5991..6164)
DNA (174bp) protein (58aa)

This feature has no annotations

sw_11_scaffold_448_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6192..6566
DNA (375bp) protein (125aa)
Chain length determinant protein
id=24657446 bin=Salinibacter_ruber tax=Salinibacter_ruber
Chain length determinant protein {ECO:0000313|EMBL:CBH23610.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_11_scaffold_448_9
unknown

Not on your lists

comp(7013..7441)
DNA (429bp) protein (143aa)

This feature has no annotations

sw_11_scaffold_448_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7550..8416
DNA (867bp) protein (289aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGZ9_RHOM4
lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:ACY47784.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="R
sw_11_scaffold_448_11
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8476..9933
DNA (1458bp) protein (486aa)
Polysaccharide biosynthesis protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W3G7_9EURY
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ELY44004.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bang
polysaccharide biosynthesis protein
sw_11_scaffold_448_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9921..11126
DNA (1206bp) protein (402aa)
Glycosyltransferase, group 1 family protein n=4 Tax=Bacteroides RepID=C6Z208_9BACE
Glycosyl transferase fsmily 1 {ECO:0000313|EMBL:AJR19414.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
glycosyltransferase family protein
sw_11_scaffold_448_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11116..12516
DNA (1401bp) protein (467aa)
Putative membrane protein {ECO:0000313|EMBL:KDS66519.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides dist
sw_11_scaffold_448_14
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12629..13528
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A9A0X4_DESOH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW67599.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus
sw_11_scaffold_448_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

13800..14897
DNA (1098bp) protein (366aa)
putative phosphatidylinositol alpha-mannosyltransferase (EC:2.4.1.57)
Putative Phosphatidylinositol alpha-mannosyltransferase {ECO:0000313|EMBL:CBK42406.1}; EC=2.4.1.57 {ECO:0000313|EMBL:CBK42406.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospir
Putative Phosphatidylinositol alpha-mannosyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGL9_9BACT
sw_11_scaffold_448_16
unknown

Not on your lists

15579..15782
DNA (204bp) protein (68aa)

This feature has no annotations

sw_11_scaffold_448_17
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

15746..16753
DNA (1008bp) protein (336aa)
Uncharacterized protein id=3860449 bin=GWF2_Planctomycete_41_51 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein Tax=GWF2_Planctomycetes_41_51_curated
hypothetical protein
sw_11_scaffold_448_18
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16806..18002
DNA (1197bp) protein (399aa)
glycosyl transferase family 1 n=1 Tax=Salisaeta longa RepID=UPI0003B61442
Glycosyl transferase family 1 {ECO:0000313|EMBL:KHD12380.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Th
group 1 glycosyl transferase
sw_11_scaffold_448_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18045..18929)
DNA (885bp) protein (295aa)
ISSru4, transposase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S493_SALRD
ISSru4, transposase
ISSru4, transposase {ECO:0000313|EMBL:ABC45048.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
Displaying 20 items

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