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sw_11_scaffold_468

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_468_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..1956)
DNA (1956bp) protein (652aa)
Putative membrane protein required for N-linked glycosylation n=1 Tax=halophilic archaeon J07HX64 RepID=U1NZV1_9EURY
Putative membrane protein required for N-linked glycosylation {ECO:0000313|EMBL:ERH09825.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
tot; transmembrane oligosaccharyl transferase
sw_11_scaffold_468_2
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1992..2333
DNA (342bp) protein (114aa)
Transposase ISHwa4 n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XAF4_9EURY
Transposase ISHwa4 {ECO:0000313|EMBL:ELY58734.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 18795.;"
transposase ISHwa4
sw_11_scaffold_468_3
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2377..2892
DNA (516bp) protein (172aa)
Transposase (ISH5) n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4H0E0_HALVD
transposase (ISH5)
Transposase (ISH5) {ECO:0000313|EMBL:ADE05212.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 29605
sw_11_scaffold_468_4
unknown

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3395..4645
DNA (1251bp) protein (417aa)

This feature has no annotations

sw_11_scaffold_468_5
unknown

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comp(4596..4862)
DNA (267bp) protein (89aa)

This feature has no annotations

sw_11_scaffold_468_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5020..6123)
DNA (1104bp) protein (368aa)
Transposase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQR9_9EURY
transposase
Transposase {ECO:0000313|EMBL:CCQ34910.1}; Transposase protein {ECO:0000313|EMBL:ERJ05696.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdu
sw_11_scaffold_468_7
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

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6249..7211
DNA (963bp) protein (321aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0R4U4_MYCS2
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
NAD-dependent epimerase
sw_11_scaffold_468_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7211..8131
DNA (921bp) protein (307aa)
UDP-N-acetyl-D-mannosamine 6-dehydrogenase n=1 Tax=Halogranum salarium B-1 RepID=J2ZB18_9EURY
UDP-N-acetyl-D-mannosamine 6-dehydrogenase {ECO:0000313|EMBL:EJN57845.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.
NDP-sugar dehydrogenase
sw_11_scaffold_468_9
unknown

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8128..8412
DNA (285bp) protein (95aa)

This feature has no annotations

sw_11_scaffold_468_10
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8409..10163
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NM68_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ67273.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_11_scaffold_468_11
unknown

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10364..10453
DNA (90bp) protein (30aa)

This feature has no annotations

sw_11_scaffold_468_12
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10453..10758
DNA (306bp) protein (102aa)
Transposase (IS1595) n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6CV38_9EURY
transposase (IS1595)
Transposase (IS1595) {ECO:0000313|EMBL:CCQ34242.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;
sw_11_scaffold_468_13
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11060..12034)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NSR1_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10722.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_11_scaffold_468_14
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12212..13147)
DNA (936bp) protein (312aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AKH97417.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AKH97417.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halana
Nucleoside-diphosphate-sugar epimerase ( dTDP-glucose 4,6-dehydratase) n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PQE7_9EURY
gmd; nucleoside-diphosphate-sugar epimerase ( dTDP-glucose 4,6-dehydratase)
sw_11_scaffold_468_15
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13262..14542
DNA (1281bp) protein (427aa)
Nucleotide sugar dehydrogenase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W2W8_9EURY
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ELY42668.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense
UDP-N-acetyl-D-mannosaminuronate dehydrogenase
sw_11_scaffold_468_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14692..15831)
DNA (1140bp) protein (380aa)
LPS glycosyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JMG3_HALVA
LPS glycosyltransferase {ECO:0000313|EMBL:EMA10201.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
lpg3; LPS glycosyltransferase
sw_11_scaffold_468_17

Not on your lists

16078..17157
DNA (1080bp) protein (360aa)
Marine sediment metagenome DNA, contig: S03H2_C00002 {ECO:0000313|EMBL:GAH24926.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative carbamoylphosphate synthase large subunit, short form id=3398306 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
sw_11_scaffold_468_18
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17242..18063)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHQ1_AFIFE
mandelate racemase/muconate lactonizing protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
O-succinylbenzoate-CoA synthase
Displaying 18 items

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