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sw_11_scaffold_478

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_478_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..381
DNA (381bp) protein (127aa)
50S ribosomal protein L15P n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKF2_NATM8
rpl15; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
sw_11_scaffold_478_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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382..1896
DNA (1515bp) protein (505aa)
Protein translocase subunit SecY n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP42_NATM8
secY; protein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=268739
sw_11_scaffold_478_3

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comp(2099..4243)
DNA (2145bp) protein (715aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZMI3_9ARCH
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ESS03665.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
ugpC3; sugar ABC transporter ATP-binding protein
sw_11_scaffold_478_4
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4240..4746)
DNA (507bp) protein (169aa)
ABC-type sugar transport system, permease component n=1 Tax=halophilic archaeon J07HB67 RepID=U1R1Q8_9EURY
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERH13643.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;
binding-protein-dependent transport system inner membrane protein
sw_11_scaffold_478_5

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comp(5240..6448)
DNA (1209bp) protein (403aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR67 RepID=V4XNP0_9ARCH
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:ESS03663.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
ABC transporter substrate-binding protein
sw_11_scaffold_478_6
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6811..7281)
DNA (471bp) protein (157aa)
Putative membrane-bound metal-dependent hydrolase n=2 Tax=Haloarcula RepID=Q5V6P2_HALMA
putative membrane-bound metal-dependent hydrolase
Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA21538.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Ha
sw_11_scaffold_478_7
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7309..8070)
DNA (762bp) protein (254aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTH3_HALUD
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ACV12163.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus uta
sw_11_scaffold_478_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8201..8584)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTH2_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12162.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_11_scaffold_478_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8744..9613
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTH0_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12160.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_11_scaffold_478_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9771..11108
DNA (1338bp) protein (446aa)
TrkA domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMW4_NATPD
trkA; potassium transporter peripheral membrane component rbh
TrkA domain protein {ECO:0000313|EMBL:CAI50542.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_11_scaffold_478_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11165..11524
DNA (360bp) protein (120aa)
Trk-type transport system (Probable substrate potassium) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMW3_NATPD
tp29u2_1; Trk-type transport system ( substrate potassium) 1, subunit 2.1
Trk-type transport system (Probable substrate potassium) {ECO:0000313|EMBL:CAI50543.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" s
sw_11_scaffold_478_12
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11650..13236
DNA (1587bp) protein (529aa)
Cation transporter n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PFU5_9EURY
Cation transporter {ECO:0000313|EMBL:EMA68936.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
cation transporter
sw_11_scaffold_478_13
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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13325..14005
DNA (681bp) protein (227aa)
Trk potassium uptake system protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GAQ0_9EURY
Trk potassium uptake system protein {ECO:0000313|EMBL:ELZ68597.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense
TrkA-N domain protein
sw_11_scaffold_478_14
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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14127..14900
DNA (774bp) protein (258aa)
Trk-type K+ transport system, membrane component n=1 Tax=Halonotius sp. J07HN6 RepID=U1Q754_9EURY
Trk-type K+ transport system, membrane component {ECO:0000313|EMBL:ERH00852.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halono
potassium transport system protein trkH1
sw_11_scaffold_478_15
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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14938..15612
DNA (675bp) protein (225aa)
Cation transporter n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RT83_HALTV
cation transporter
Cation transporter {ECO:0000313|EMBL:ADB60963.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strain ATC
sw_11_scaffold_478_16
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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15609..15809
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JL61_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB31588.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_11_scaffold_478_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(15830..16069)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Natronomonas pharaonis RepID=Q3IMW1_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50545.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_478_18
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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16157..16789
DNA (633bp) protein (211aa)
adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VT75_9EURY
sw_11_scaffold_478_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17009..17905
DNA (897bp) protein (299aa)
DUF106 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSZ7_NATM8
DUF106 family protein
DUF106 family protein {ECO:0000313|EMBL:CCQ37522.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
sw_11_scaffold_478_20
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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18078..18455
DNA (378bp) protein (126aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
Cytidylate kinase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NVG5_HALUD
sw_11_scaffold_478_21
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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18598..19476
DNA (879bp) protein (293aa)
cbf5; tRNA/rRNA pseudouridine synthase Cbf5 (EC:5.4.99.12)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSY9_NATM8
sw_11_scaffold_478_trna_1
unknown

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19642..19712
DNA (71bp)
transferRNA
sw_11_scaffold_478_22
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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20100..20564
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NS50_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10657.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_11_scaffold_478_23
unknown

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20698..21030
DNA (333bp) protein (111aa)

This feature has no annotations

sw_11_scaffold_478_24
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(21153..21719)
DNA (567bp) protein (189aa)
maltose O-acetyltransferase (EC:2.3.1.79)
Hypoxanthine phosphoribosyltransferase protein {ECO:0000313|EMBL:ERJ04882.1}; EC=2.4.2.8 {ECO:0000313|EMBL:ERJ04882.1};; Maltose O-acetyltransferase {ECO:0000313|EMBL:CCQ33322.1}; EC=2.3.1.79 {ECO:000
Hypoxanthine phosphoribosyltransferase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQJ4_9EURY
sw_11_scaffold_478_25
unknown

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comp(21902..22096)
DNA (195bp) protein (65aa)

This feature has no annotations

sw_11_scaffold_478_26

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22165..22575
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=uncultured prokaryote RepID=H5S8S9_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:BAL52565.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
Serine phosphatase RsbU, regulator of sigma subunit
Displaying 27 items

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