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sw_11_scaffold_512

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_512_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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989..2692
DNA (1704bp) protein (568aa)
Multicopper oxidase type 3 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L7X6_9EURY
Multicopper oxidase type 3 {ECO:0000313|EMBL:EMA28015.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
multicopper oxidase type 3
sw_11_scaffold_512_2
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2982..3524
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WNP7_BURSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJZ56626.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungo
sw_11_scaffold_512_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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3657..4610
DNA (954bp) protein (318aa)
GMP synthase-Glutamine amidotransferase domain (EC:6.3.5.2) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
GMP synthase-Glutamine amidotransferase domain (EC:6.3.5.2)
GMP synthase-Glutamine amidotransferase domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EWL3_9BACT
sw_11_scaffold_512_4
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4640..5539)
DNA (900bp) protein (300aa)
Hydrolase, alpha/beta hydrolase fold family protein n=1 Tax=Rhodopirellula europaea SH398 RepID=M5RVC8_9PLAN
Hydrolase, alpha/beta hydrolase fold family protein {ECO:0000313|EMBL:EMI23161.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.
hydrolase
sw_11_scaffold_512_5
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5655..6218)
DNA (564bp) protein (188aa)
Transcriptional regulator, TetR family n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0ILB1_LEPFC
regulatory protein TetR Tax=RBG_16_Gammaproteobacteria_51_14_curated
TetR family transcriptional regulator
sw_11_scaffold_512_6
unknown

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6406..6660
DNA (255bp) protein (85aa)

This feature has no annotations

sw_11_scaffold_512_7
unknown

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comp(6682..6837)
DNA (156bp) protein (52aa)

This feature has no annotations

sw_11_scaffold_512_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7047..7703
DNA (657bp) protein (219aa)
Menaquinone biosynthesis methyltransferase ubiE {ECO:0000313|EMBL:ABC44296.1}; EC=2.1.1.- {ECO:0000313|EMBL:ABC44296.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
Menaquinone biosynthesis methyltransferase ubiE n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S268_SALRD
menaquinone biosynthesis methyltransferase ubiE
sw_11_scaffold_512_9
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7845..8264)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255F440
Uncharacterized protein {ECO:0000313|EMBL:KFC52059.1}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus lysodeikticus
hypothetical protein
sw_11_scaffold_512_10
unknown

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comp(8428..8556)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_11_scaffold_512_11
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(8613..9293)
DNA (681bp) protein (227aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CV50_TRURR
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADI15877.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiov
sw_11_scaffold_512_12
Parcubacteria bacterium GW2011_GWC2_45_7, Parcubacteria, Bacteria

Not on your lists

comp(9934..10764)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00035DA02E
Uncharacterized protein {ECO:0000313|EMBL:KKU12207.1}; TaxID=1618932 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_7.;"
Isopentenyl phosphate kinase
sw_11_scaffold_512_13
R_RIF_OP11_03_50_28, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(10809..11804)
DNA (996bp) protein (332aa)
mvaD; diphosphomevalonate decarboxylase (EC:4.1.1.33); K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33] Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_50_28_curated
Diphosphomevalonate decarboxylase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5R2_CALAS
mvaD; diphosphomevalonate decarboxylase
sw_11_scaffold_512_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11785..12876)
DNA (1092bp) protein (364aa)
hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI0003723062
Uncharacterized protein {ECO:0000313|EMBL:KJZ41404.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluoresce
sw_11_scaffold_512_15
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12899..14251)
DNA (1353bp) protein (451aa)
3-hydroxy-3-methylglutaryl-CoA reductase (EC:1.1.1.34)
3-hydroxy-3-methylglutaryl-coenzyme A reductase n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZRL4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KJZ41403.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluoresce
sw_11_scaffold_512_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14748..15896)
DNA (1149bp) protein (383aa)
Putative cell division cycle protein {ECO:0000313|EMBL:CBH25040.1}; EC=3.4.24.- {ECO:0000313|EMBL:CBH25040.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
cell division cycle protein
cell division cycle protein id=24657832 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_11_scaffold_512_17
unknown

Not on your lists

comp(16261..16743)
DNA (483bp) protein (161aa)

This feature has no annotations

sw_11_scaffold_512_18
unknown

Not on your lists

comp(16721..16786)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 18 items

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