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sw_11_scaffold_519

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_519_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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28..312
DNA (285bp) protein (95aa)
hypothetical protein id=24646003 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10219.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_11_scaffold_519_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(293..967)
DNA (675bp) protein (225aa)
5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193)
2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)p yrimidine1-reductase {ECO:0000313|EMBL:ACV48526.1}; EC=1.1.1.193 {ECO:0000313|EMBL:ACV48526.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobact
5-amino-6-(5-phosphoribosylamino)uracil reductase n=1 Tax=Halomicrobium katesii RepID=UPI000375173D
sw_11_scaffold_519_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1024..2802)
DNA (1779bp) protein (593aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC:4.2.99.20)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNX8_9EURY
sw_11_scaffold_519_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2799..4142)
DNA (1344bp) protein (448aa)
menF; menaquinone-specific isochorismate synthase (EC:5.4.4.2)
Menaquinone-specific isochorismate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR41_9EURY
Menaquinone-specific isochorismate synthase {ECO:0000313|EMBL:ELZ24349.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosim
sw_11_scaffold_519_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4249..4728
DNA (480bp) protein (160aa)
cyclase/dehydrase id=24648349 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH09481.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
cyclase/dehydrase
sw_11_scaffold_519_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4801..5031
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Haloquadratum walsbyi RepID=G0LIY0_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC40548.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_11_scaffold_519_7
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5032..5829)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JWU1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA13637.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
sw_11_scaffold_519_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5987..6760
DNA (774bp) protein (258aa)
Putative transcriptional regulator n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRV7_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:ERH09918.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
transcriptional regulator TrmB
sw_11_scaffold_519_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6830..7126
DNA (297bp) protein (99aa)
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000313|EMBL:ELZ27303.1}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_0
Endonuclease III n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I7F6_9EURY
sw_11_scaffold_519_10
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7184..7840)
DNA (657bp) protein (219aa)
DNA lyase n=1 Tax=Halorubrum sp. T3 RepID=UPI0003627ECE
HhH-GPD family protein {ECO:0000313|EMBL:ELZ39180.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14
HhH-GPD family protein
Displaying 10 items

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