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sw_11_scaffold_542

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_542_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2..1177)
DNA (1176bp) protein (392aa)
CRISPR-associated protein Cas3 n=1 Tax=Salisaeta longa RepID=UPI0003B42EAF
CRISPR-associated helicase Cas3
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:ACY47382.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
sw_11_scaffold_542_2
unknown

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comp(1427..1540)
DNA (114bp) protein (38aa)

This feature has no annotations

sw_11_scaffold_542_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1614..2147)
DNA (534bp) protein (178aa)
DNA polymerase III n=1 Tax=Salisaeta longa RepID=UPI0003B3E823
exonuclease RNase T and DNA polymerase III
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:AEN72427.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_11_scaffold_542_4
unknown

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comp(2365..2871)
DNA (507bp) protein (169aa)

This feature has no annotations

sw_11_scaffold_542_5
unknown

Not on your lists

comp(2862..3245)
DNA (384bp) protein (128aa)

This feature has no annotations

sw_11_scaffold_542_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3426..3806
DNA (381bp) protein (127aa)
Transcriptional regulator, LacI family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MER8_RHOM4
regulatory protein LacI
Regulatory protein LacI {ECO:0000313|EMBL:AHG92001.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
sw_11_scaffold_542_7
Halomonas elongata, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4709..5140
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B366E1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBV41093.1}; TaxID=768066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas elongata (
sw_11_scaffold_542_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5188..6906
DNA (1719bp) protein (573aa)
GMC family oxidoreductase n=1 Tax=Salisaeta longa RepID=UPI0003B2F018
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ACY48622.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="R
sw_11_scaffold_542_9
Vibrio furnissii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7442..7750
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Vibrio furnissii (strain DSM 14383 / NCTC 11218) RepID=F0LWH4_VIBFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADT88113.1}; TaxID=903510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio furnissii (strain DSM 14
sw_11_scaffold_542_10
unknown

Not on your lists

comp(8202..8753)
DNA (552bp) protein (184aa)

This feature has no annotations

sw_11_scaffold_542_11
unknown

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comp(9123..9323)
DNA (201bp) protein (67aa)

This feature has no annotations

sw_11_scaffold_542_12
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

9637..10722
DNA (1086bp) protein (362aa)
Transposase IS4 family protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BA85_MEISD
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADH64220.1}; Uncharacterized protein {ECO:0000313|EMBL:ADH65053.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermac
sw_11_scaffold_542_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10858..11082
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B6C720
protein of unknown function DUF433 Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
sw_11_scaffold_542_14
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11079..11411
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3D500
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ14875.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
sw_11_scaffold_542_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11650..12015
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6M9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23684.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_542_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12027..12380
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6N0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23685.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_11_scaffold_542_17
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12454..13284
DNA (831bp) protein (277aa)
Glycosyl transferase, group 1 n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NNE0_9DELT
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EAT03215.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
group 1 glycosyl transferase
Displaying 17 items

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